Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.74
SPHK1Q9NYA1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SPHK1Q9NYA1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.64■□□□□ 0.74
SPHK1Q9NYA1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SPHK1Q9NYA1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SPHK1Q9NYA1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SPHK1Q9NYA1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPHK1Q9NYA1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPHK1Q9NYA1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPHK1Q9NYA1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.64■□□□□ 0.73
SPHK1Q9NYA1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPHK1Q9NYA1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.64■□□□□ 0.73
SPHK1Q9NYA1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPHK1Q9NYA1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPHK1Q9NYA1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.64■□□□□ 0.73
SPHK1Q9NYA1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPHK1Q9NYA1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.63■□□□□ 0.73
SPHK1Q9NYA1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPHK1Q9NYA1 AC007225.1-201ENST00000566331 1836 ntBASIC19.63■□□□□ 0.73
SPHK1Q9NYA1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPHK1Q9NYA1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPHK1Q9NYA1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPHK1Q9NYA1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.63■□□□□ 0.73
SPHK1Q9NYA1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPHK1Q9NYA1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPHK1Q9NYA1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.63■□□□□ 0.73
SPHK1Q9NYA1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SPHK1Q9NYA1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.63■□□□□ 0.73
SPHK1Q9NYA1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPHK1Q9NYA1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPHK1Q9NYA1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SPHK1Q9NYA1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPHK1Q9NYA1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SPHK1Q9NYA1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SPHK1Q9NYA1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.62■□□□□ 0.73
SPHK1Q9NYA1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.62■□□□□ 0.73
SPHK1Q9NYA1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SPHK1Q9NYA1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SPHK1Q9NYA1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.62■□□□□ 0.73
SPHK1Q9NYA1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.62■□□□□ 0.73
SPHK1Q9NYA1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SPHK1Q9NYA1 CD99P1-205ENST00000527459 561 ntBASIC19.62■□□□□ 0.73
SPHK1Q9NYA1 C2orf69P4-201ENST00000565394 541 ntBASIC19.62■□□□□ 0.73
SPHK1Q9NYA1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.62■□□□□ 0.73
SPHK1Q9NYA1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.62■□□□□ 0.73
SPHK1Q9NYA1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPHK1Q9NYA1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPHK1Q9NYA1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPHK1Q9NYA1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPHK1Q9NYA1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPHK1Q9NYA1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SPHK1Q9NYA1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPHK1Q9NYA1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPHK1Q9NYA1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPHK1Q9NYA1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPHK1Q9NYA1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPHK1Q9NYA1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPHK1Q9NYA1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SPHK1Q9NYA1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.61■□□□□ 0.73
SPHK1Q9NYA1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.61■□□□□ 0.73
SPHK1Q9NYA1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPHK1Q9NYA1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SPHK1Q9NYA1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPHK1Q9NYA1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SPHK1Q9NYA1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.61■□□□□ 0.73
SPHK1Q9NYA1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SPHK1Q9NYA1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPHK1Q9NYA1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.6■□□□□ 0.73
SPHK1Q9NYA1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPHK1Q9NYA1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPHK1Q9NYA1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPHK1Q9NYA1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SPHK1Q9NYA1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.6■□□□□ 0.73
SPHK1Q9NYA1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.6■□□□□ 0.73
SPHK1Q9NYA1 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.6■□□□□ 0.73
SPHK1Q9NYA1 RNA5SP413-201ENST00000516373 109 ntBASIC19.6■□□□□ 0.73
SPHK1Q9NYA1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.6■□□□□ 0.73
SPHK1Q9NYA1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
SPHK1Q9NYA1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.6■□□□□ 0.73
SPHK1Q9NYA1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.6■□□□□ 0.73
SPHK1Q9NYA1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SPHK1Q9NYA1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SPHK1Q9NYA1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.6■□□□□ 0.73
SPHK1Q9NYA1 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.6■□□□□ 0.73
SPHK1Q9NYA1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPHK1Q9NYA1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPHK1Q9NYA1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
SPHK1Q9NYA1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SPHK1Q9NYA1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SPHK1Q9NYA1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
SPHK1Q9NYA1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SPHK1Q9NYA1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.59■□□□□ 0.73
SPHK1Q9NYA1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.59■□□□□ 0.73
SPHK1Q9NYA1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SPHK1Q9NYA1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.59■□□□□ 0.73
SPHK1Q9NYA1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SPHK1Q9NYA1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.59■□□□□ 0.73
SPHK1Q9NYA1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SPHK1Q9NYA1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
SPHK1Q9NYA1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms