Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MKS1Q9NXB0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
MKS1Q9NXB0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MKS1Q9NXB0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MKS1Q9NXB0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.11■□□□□ 0.81
MKS1Q9NXB0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MKS1Q9NXB0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MKS1Q9NXB0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.11■□□□□ 0.81
MKS1Q9NXB0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MKS1Q9NXB0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.11■□□□□ 0.81
MKS1Q9NXB0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MKS1Q9NXB0 AF213884.3-201ENST00000563833 479 ntBASIC20.11■□□□□ 0.81
MKS1Q9NXB0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
MKS1Q9NXB0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.11■□□□□ 0.81
MKS1Q9NXB0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.11■□□□□ 0.81
MKS1Q9NXB0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MKS1Q9NXB0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
MKS1Q9NXB0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
MKS1Q9NXB0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MKS1Q9NXB0 AL691432.2-201ENST00000607222 2038 ntBASIC20.1■□□□□ 0.81
MKS1Q9NXB0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MKS1Q9NXB0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
MKS1Q9NXB0 DPP3P2-201ENST00000416030 1696 ntBASIC20.1■□□□□ 0.81
MKS1Q9NXB0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MKS1Q9NXB0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MKS1Q9NXB0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.1■□□□□ 0.81
MKS1Q9NXB0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MKS1Q9NXB0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.1■□□□□ 0.81
MKS1Q9NXB0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MKS1Q9NXB0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MKS1Q9NXB0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MKS1Q9NXB0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
MKS1Q9NXB0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.1■□□□□ 0.81
MKS1Q9NXB0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
MKS1Q9NXB0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MKS1Q9NXB0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
MKS1Q9NXB0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MKS1Q9NXB0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MKS1Q9NXB0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
MKS1Q9NXB0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.1■□□□□ 0.81
MKS1Q9NXB0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
MKS1Q9NXB0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MKS1Q9NXB0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
MKS1Q9NXB0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.1■□□□□ 0.81
MKS1Q9NXB0 AC087289.5-201ENST00000586076 3175 ntBASIC20.09■□□□□ 0.81
MKS1Q9NXB0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
MKS1Q9NXB0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
MKS1Q9NXB0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.09■□□□□ 0.81
MKS1Q9NXB0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
MKS1Q9NXB0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.09■□□□□ 0.81
MKS1Q9NXB0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MKS1Q9NXB0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
MKS1Q9NXB0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MKS1Q9NXB0 AC096631.2-201ENST00000436136 790 ntBASIC20.09■□□□□ 0.81
MKS1Q9NXB0 AL358852.1-201ENST00000623174 1268 ntBASIC20.09■□□□□ 0.81
MKS1Q9NXB0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MKS1Q9NXB0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
MKS1Q9NXB0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
MKS1Q9NXB0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MKS1Q9NXB0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MKS1Q9NXB0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
MKS1Q9NXB0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MKS1Q9NXB0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MKS1Q9NXB0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MKS1Q9NXB0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.08■□□□□ 0.81
MKS1Q9NXB0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MKS1Q9NXB0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MKS1Q9NXB0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.08■□□□□ 0.81
MKS1Q9NXB0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MKS1Q9NXB0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MKS1Q9NXB0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.08■□□□□ 0.81
MKS1Q9NXB0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.08■□□□□ 0.81
MKS1Q9NXB0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
MKS1Q9NXB0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
MKS1Q9NXB0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.08■□□□□ 0.8
MKS1Q9NXB0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MKS1Q9NXB0 AL020996.1-203ENST00000536896 2307 ntBASIC20.08■□□□□ 0.8
MKS1Q9NXB0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MKS1Q9NXB0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
MKS1Q9NXB0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MKS1Q9NXB0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
MKS1Q9NXB0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
MKS1Q9NXB0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.07■□□□□ 0.8
MKS1Q9NXB0 AL031432.3-201ENST00000607698 485 ntBASIC20.07■□□□□ 0.8
MKS1Q9NXB0 AC243732.1-201ENST00000612648 864 ntBASIC20.07■□□□□ 0.8
MKS1Q9NXB0 AL136967.2-201ENST00000623968 743 ntBASIC20.07■□□□□ 0.8
MKS1Q9NXB0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MKS1Q9NXB0 TREX1-205ENST00000625293 1783 ntBASIC20.07■□□□□ 0.8
MKS1Q9NXB0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
MKS1Q9NXB0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
MKS1Q9NXB0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.07■□□□□ 0.8
MKS1Q9NXB0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MKS1Q9NXB0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MKS1Q9NXB0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.07■□□□□ 0.8
MKS1Q9NXB0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
MKS1Q9NXB0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MKS1Q9NXB0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.07■□□□□ 0.8
MKS1Q9NXB0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.07■□□□□ 0.8
MKS1Q9NXB0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
MKS1Q9NXB0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms