Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SLC52A1Q9NWF4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC29.43■■■□□ 2.3
SLC52A1Q9NWF4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
SLC52A1Q9NWF4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC29.43■■■□□ 2.3
SLC52A1Q9NWF4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
SLC52A1Q9NWF4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SLC52A1Q9NWF4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SLC52A1Q9NWF4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SLC52A1Q9NWF4 AC242852.2-201ENST00000615738 1807 ntBASIC29.43■■■□□ 2.3
SLC52A1Q9NWF4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC29.43■■■□□ 2.3
SLC52A1Q9NWF4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
SLC52A1Q9NWF4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SLC52A1Q9NWF4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SLC52A1Q9NWF4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SLC52A1Q9NWF4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
SLC52A1Q9NWF4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SLC52A1Q9NWF4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC29.42■■■□□ 2.3
SLC52A1Q9NWF4 AL355355.2-201ENST00000442321 338 ntBASIC29.42■■■□□ 2.3
SLC52A1Q9NWF4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SLC52A1Q9NWF4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SLC52A1Q9NWF4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC29.42■■■□□ 2.3
SLC52A1Q9NWF4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC29.42■■■□□ 2.3
SLC52A1Q9NWF4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
SLC52A1Q9NWF4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SLC52A1Q9NWF4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
SLC52A1Q9NWF4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC29.42■■■□□ 2.3
SLC52A1Q9NWF4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SLC52A1Q9NWF4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
SLC52A1Q9NWF4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
SLC52A1Q9NWF4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
SLC52A1Q9NWF4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SLC52A1Q9NWF4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC29.41■■■□□ 2.3
SLC52A1Q9NWF4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SLC52A1Q9NWF4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC29.41■■■□□ 2.3
SLC52A1Q9NWF4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC29.41■■■□□ 2.3
SLC52A1Q9NWF4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC29.41■■■□□ 2.3
SLC52A1Q9NWF4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC29.41■■■□□ 2.3
SLC52A1Q9NWF4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SLC52A1Q9NWF4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
SLC52A1Q9NWF4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC29.41■■■□□ 2.3
SLC52A1Q9NWF4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SLC52A1Q9NWF4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SLC52A1Q9NWF4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SLC52A1Q9NWF4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC29.41■■■□□ 2.3
SLC52A1Q9NWF4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC29.41■■■□□ 2.3
SLC52A1Q9NWF4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
SLC52A1Q9NWF4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
SLC52A1Q9NWF4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SLC52A1Q9NWF4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC29.4■■■□□ 2.3
SLC52A1Q9NWF4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
SLC52A1Q9NWF4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SLC52A1Q9NWF4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
SLC52A1Q9NWF4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC29.4■■■□□ 2.3
SLC52A1Q9NWF4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC29.4■■■□□ 2.3
SLC52A1Q9NWF4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
SLC52A1Q9NWF4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC29.39■■■□□ 2.3
SLC52A1Q9NWF4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
SLC52A1Q9NWF4 TMPOP1-202ENST00000424642 1267 ntBASIC29.39■■■□□ 2.3
SLC52A1Q9NWF4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC29.39■■■□□ 2.3
SLC52A1Q9NWF4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
SLC52A1Q9NWF4 NBPF21P-201ENST00000425093 1451 ntBASIC29.39■■■□□ 2.3
SLC52A1Q9NWF4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SLC52A1Q9NWF4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
SLC52A1Q9NWF4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
SLC52A1Q9NWF4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
SLC52A1Q9NWF4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC29.38■■■□□ 2.29
SLC52A1Q9NWF4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SLC52A1Q9NWF4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SLC52A1Q9NWF4 AL445228.2-201ENST00000605589 952 ntBASIC29.38■■■□□ 2.29
SLC52A1Q9NWF4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC29.38■■■□□ 2.29
SLC52A1Q9NWF4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SLC52A1Q9NWF4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SLC52A1Q9NWF4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
SLC52A1Q9NWF4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
SLC52A1Q9NWF4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
SLC52A1Q9NWF4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC29.37■■■□□ 2.29
SLC52A1Q9NWF4 AC011484.1-201ENST00000377652 1995 ntBASIC29.37■■■□□ 2.29
SLC52A1Q9NWF4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
SLC52A1Q9NWF4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC29.37■■■□□ 2.29
SLC52A1Q9NWF4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
SLC52A1Q9NWF4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
SLC52A1Q9NWF4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
SLC52A1Q9NWF4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC29.37■■■□□ 2.29
SLC52A1Q9NWF4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
SLC52A1Q9NWF4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC29.37■■■□□ 2.29
SLC52A1Q9NWF4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
SLC52A1Q9NWF4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
SLC52A1Q9NWF4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
SLC52A1Q9NWF4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC29.37■■■□□ 2.29
SLC52A1Q9NWF4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC29.36■■■□□ 2.29
SLC52A1Q9NWF4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC29.36■■■□□ 2.29
SLC52A1Q9NWF4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SLC52A1Q9NWF4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SLC52A1Q9NWF4 F2R-202ENST00000505600 442 ntTSL 2 BASIC29.36■■■□□ 2.29
SLC52A1Q9NWF4 RN7SL850P-201ENST00000579959 291 ntBASIC29.36■■■□□ 2.29
SLC52A1Q9NWF4 AC145285.6-201ENST00000604632 637 ntBASIC29.36■■■□□ 2.29
SLC52A1Q9NWF4 AC073195.1-201ENST00000607241 877 ntBASIC29.36■■■□□ 2.29
SLC52A1Q9NWF4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SLC52A1Q9NWF4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC29.36■■■□□ 2.29
SLC52A1Q9NWF4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC29.36■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms