Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TREX1Q9NSU2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TREX1Q9NSU2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.36■□□□□ 0.85
TREX1Q9NSU2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TREX1Q9NSU2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
TREX1Q9NSU2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TREX1Q9NSU2 AL391422.3-201ENST00000603791 2761 ntBASIC20.35■□□□□ 0.85
TREX1Q9NSU2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TREX1Q9NSU2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.35■□□□□ 0.85
TREX1Q9NSU2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TREX1Q9NSU2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.35■□□□□ 0.85
TREX1Q9NSU2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.35■□□□□ 0.85
TREX1Q9NSU2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TREX1Q9NSU2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TREX1Q9NSU2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.35■□□□□ 0.85
TREX1Q9NSU2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TREX1Q9NSU2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TREX1Q9NSU2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TREX1Q9NSU2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
TREX1Q9NSU2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TREX1Q9NSU2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TREX1Q9NSU2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
TREX1Q9NSU2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TREX1Q9NSU2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.35■□□□□ 0.85
TREX1Q9NSU2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TREX1Q9NSU2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.34■□□□□ 0.85
TREX1Q9NSU2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TREX1Q9NSU2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TREX1Q9NSU2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.34■□□□□ 0.85
TREX1Q9NSU2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TREX1Q9NSU2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TREX1Q9NSU2 SMG8-203ENST00000578922 2178 ntBASIC20.34■□□□□ 0.85
TREX1Q9NSU2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.34■□□□□ 0.85
TREX1Q9NSU2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TREX1Q9NSU2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TREX1Q9NSU2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TREX1Q9NSU2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.34■□□□□ 0.85
TREX1Q9NSU2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TREX1Q9NSU2 AL356652.1-201ENST00000615962 565 ntBASIC20.34■□□□□ 0.85
TREX1Q9NSU2 BID-214ENST00000617586 542 ntTSL 5 BASIC20.34■□□□□ 0.85
TREX1Q9NSU2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TREX1Q9NSU2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TREX1Q9NSU2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TREX1Q9NSU2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
TREX1Q9NSU2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TREX1Q9NSU2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TREX1Q9NSU2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TREX1Q9NSU2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TREX1Q9NSU2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TREX1Q9NSU2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TREX1Q9NSU2 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.34■□□□□ 0.85
TREX1Q9NSU2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TREX1Q9NSU2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.33■□□□□ 0.85
TREX1Q9NSU2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.33■□□□□ 0.85
TREX1Q9NSU2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TREX1Q9NSU2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.33■□□□□ 0.85
TREX1Q9NSU2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TREX1Q9NSU2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.33■□□□□ 0.85
TREX1Q9NSU2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.33■□□□□ 0.85
TREX1Q9NSU2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.33■□□□□ 0.85
TREX1Q9NSU2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TREX1Q9NSU2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TREX1Q9NSU2 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TREX1Q9NSU2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.33■□□□□ 0.85
TREX1Q9NSU2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.33■□□□□ 0.85
TREX1Q9NSU2 RARRES2P4-201ENST00000514074 484 ntBASIC20.33■□□□□ 0.85
TREX1Q9NSU2 AC022517.1-201ENST00000592429 346 ntBASIC20.33■□□□□ 0.85
TREX1Q9NSU2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
TREX1Q9NSU2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TREX1Q9NSU2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TREX1Q9NSU2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TREX1Q9NSU2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.32■□□□□ 0.84
TREX1Q9NSU2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TREX1Q9NSU2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.32■□□□□ 0.84
TREX1Q9NSU2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.32■□□□□ 0.84
TREX1Q9NSU2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
TREX1Q9NSU2 AC112907.3-201ENST00000577781 2400 ntBASIC20.32■□□□□ 0.84
TREX1Q9NSU2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TREX1Q9NSU2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TREX1Q9NSU2 PGM5P4-201ENST00000421970 445 ntBASIC20.32■□□□□ 0.84
TREX1Q9NSU2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.32■□□□□ 0.84
TREX1Q9NSU2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.32■□□□□ 0.84
TREX1Q9NSU2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TREX1Q9NSU2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TREX1Q9NSU2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TREX1Q9NSU2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TREX1Q9NSU2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TREX1Q9NSU2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TREX1Q9NSU2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TREX1Q9NSU2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.32■□□□□ 0.84
TREX1Q9NSU2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TREX1Q9NSU2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TREX1Q9NSU2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TREX1Q9NSU2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TREX1Q9NSU2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.31■□□□□ 0.84
TREX1Q9NSU2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.31■□□□□ 0.84
TREX1Q9NSU2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
TREX1Q9NSU2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TREX1Q9NSU2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TREX1Q9NSU2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms