Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.07
TLR9Q9NR96 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.7■■□□□ 1.07
TLR9Q9NR96 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TLR9Q9NR96 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TLR9Q9NR96 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.7■■□□□ 1.06
TLR9Q9NR96 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TLR9Q9NR96 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TLR9Q9NR96 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TLR9Q9NR96 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
TLR9Q9NR96 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
TLR9Q9NR96 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
TLR9Q9NR96 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TLR9Q9NR96 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.7■■□□□ 1.06
TLR9Q9NR96 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.7■■□□□ 1.06
TLR9Q9NR96 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.7■■□□□ 1.06
TLR9Q9NR96 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TLR9Q9NR96 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TLR9Q9NR96 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.7■■□□□ 1.06
TLR9Q9NR96 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.7■■□□□ 1.06
TLR9Q9NR96 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.7■■□□□ 1.06
TLR9Q9NR96 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.7■■□□□ 1.06
TLR9Q9NR96 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.7■■□□□ 1.06
TLR9Q9NR96 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TLR9Q9NR96 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TLR9Q9NR96 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TLR9Q9NR96 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TLR9Q9NR96 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TLR9Q9NR96 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TLR9Q9NR96 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TLR9Q9NR96 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TLR9Q9NR96 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TLR9Q9NR96 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
TLR9Q9NR96 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.69■■□□□ 1.06
TLR9Q9NR96 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.69■■□□□ 1.06
TLR9Q9NR96 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.69■■□□□ 1.06
TLR9Q9NR96 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.69■■□□□ 1.06
TLR9Q9NR96 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TLR9Q9NR96 AL355075.4-201ENST00000554988 638 ntBASIC21.69■■□□□ 1.06
TLR9Q9NR96 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.69■■□□□ 1.06
TLR9Q9NR96 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.69■■□□□ 1.06
TLR9Q9NR96 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.69■■□□□ 1.06
TLR9Q9NR96 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.69■■□□□ 1.06
TLR9Q9NR96 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.69■■□□□ 1.06
TLR9Q9NR96 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TLR9Q9NR96 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
TLR9Q9NR96 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TLR9Q9NR96 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.69■■□□□ 1.06
TLR9Q9NR96 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TLR9Q9NR96 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TLR9Q9NR96 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TLR9Q9NR96 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TLR9Q9NR96 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TLR9Q9NR96 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TLR9Q9NR96 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
TLR9Q9NR96 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
TLR9Q9NR96 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
TLR9Q9NR96 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TLR9Q9NR96 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TLR9Q9NR96 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.68■■□□□ 1.06
TLR9Q9NR96 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.68■■□□□ 1.06
TLR9Q9NR96 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TLR9Q9NR96 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TLR9Q9NR96 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
TLR9Q9NR96 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TLR9Q9NR96 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.68■■□□□ 1.06
TLR9Q9NR96 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.68■■□□□ 1.06
TLR9Q9NR96 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
TLR9Q9NR96 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TLR9Q9NR96 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.67■■□□□ 1.06
TLR9Q9NR96 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TLR9Q9NR96 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.67■■□□□ 1.06
TLR9Q9NR96 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TLR9Q9NR96 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TLR9Q9NR96 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TLR9Q9NR96 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
TLR9Q9NR96 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TLR9Q9NR96 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TLR9Q9NR96 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TLR9Q9NR96 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TLR9Q9NR96 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
TLR9Q9NR96 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TLR9Q9NR96 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.67■■□□□ 1.06
TLR9Q9NR96 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TLR9Q9NR96 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.67■■□□□ 1.06
TLR9Q9NR96 AC097493.4-201ENST00000641197 219 ntBASIC21.67■■□□□ 1.06
TLR9Q9NR96 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
TLR9Q9NR96 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
TLR9Q9NR96 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TLR9Q9NR96 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
TLR9Q9NR96 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TLR9Q9NR96 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.67■■□□□ 1.06
TLR9Q9NR96 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TLR9Q9NR96 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TLR9Q9NR96 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TLR9Q9NR96 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.66■■□□□ 1.06
TLR9Q9NR96 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.66■■□□□ 1.06
TLR9Q9NR96 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TLR9Q9NR96 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
TLR9Q9NR96 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TLR9Q9NR96 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms