Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TIMMDC1Q9NPL8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TIMMDC1Q9NPL8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TIMMDC1Q9NPL8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TIMMDC1Q9NPL8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.49■□□□□ 0.71
TIMMDC1Q9NPL8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TIMMDC1Q9NPL8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.49■□□□□ 0.71
TIMMDC1Q9NPL8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TIMMDC1Q9NPL8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TIMMDC1Q9NPL8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.48■□□□□ 0.71
TIMMDC1Q9NPL8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TIMMDC1Q9NPL8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.48■□□□□ 0.71
TIMMDC1Q9NPL8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TIMMDC1Q9NPL8 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.48■□□□□ 0.71
TIMMDC1Q9NPL8 KRT18P20-201ENST00000548986 1279 ntBASIC19.48■□□□□ 0.71
TIMMDC1Q9NPL8 EEF1DP3-203ENST00000566025 782 ntBASIC19.48■□□□□ 0.71
TIMMDC1Q9NPL8 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TIMMDC1Q9NPL8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.48■□□□□ 0.71
TIMMDC1Q9NPL8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TIMMDC1Q9NPL8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.48■□□□□ 0.71
TIMMDC1Q9NPL8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TIMMDC1Q9NPL8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TIMMDC1Q9NPL8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TIMMDC1Q9NPL8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TIMMDC1Q9NPL8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.47■□□□□ 0.71
TIMMDC1Q9NPL8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TIMMDC1Q9NPL8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
TIMMDC1Q9NPL8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TIMMDC1Q9NPL8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TIMMDC1Q9NPL8 CDCA4P2-201ENST00000441182 718 ntBASIC19.47■□□□□ 0.71
TIMMDC1Q9NPL8 AC026185.1-201ENST00000445748 174 ntBASIC19.47■□□□□ 0.71
TIMMDC1Q9NPL8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.47■□□□□ 0.71
TIMMDC1Q9NPL8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.47■□□□□ 0.71
TIMMDC1Q9NPL8 UBE2DNL-204ENST00000602536 740 ntBASIC19.47■□□□□ 0.71
TIMMDC1Q9NPL8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TIMMDC1Q9NPL8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TIMMDC1Q9NPL8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TIMMDC1Q9NPL8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TIMMDC1Q9NPL8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TIMMDC1Q9NPL8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TIMMDC1Q9NPL8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TIMMDC1Q9NPL8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TIMMDC1Q9NPL8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TIMMDC1Q9NPL8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.46■□□□□ 0.71
TIMMDC1Q9NPL8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TIMMDC1Q9NPL8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TIMMDC1Q9NPL8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMMDC1Q9NPL8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMMDC1Q9NPL8 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.46■□□□□ 0.71
TIMMDC1Q9NPL8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.46■□□□□ 0.71
TIMMDC1Q9NPL8 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMMDC1Q9NPL8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.46■□□□□ 0.71
TIMMDC1Q9NPL8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMMDC1Q9NPL8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMMDC1Q9NPL8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMMDC1Q9NPL8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TIMMDC1Q9NPL8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMMDC1Q9NPL8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMMDC1Q9NPL8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMMDC1Q9NPL8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TIMMDC1Q9NPL8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TIMMDC1Q9NPL8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TIMMDC1Q9NPL8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TIMMDC1Q9NPL8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TIMMDC1Q9NPL8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TIMMDC1Q9NPL8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TIMMDC1Q9NPL8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.45■□□□□ 0.7
TIMMDC1Q9NPL8 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.45■□□□□ 0.7
TIMMDC1Q9NPL8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TIMMDC1Q9NPL8 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.45■□□□□ 0.7
TIMMDC1Q9NPL8 MYCNOS-205ENST00000641950 531 ntBASIC19.45■□□□□ 0.7
TIMMDC1Q9NPL8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TIMMDC1Q9NPL8 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TIMMDC1Q9NPL8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TIMMDC1Q9NPL8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TIMMDC1Q9NPL8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TIMMDC1Q9NPL8 AC098818.2-201ENST00000564925 2320 ntBASIC19.45■□□□□ 0.7
TIMMDC1Q9NPL8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TIMMDC1Q9NPL8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TIMMDC1Q9NPL8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TIMMDC1Q9NPL8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TIMMDC1Q9NPL8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TIMMDC1Q9NPL8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TIMMDC1Q9NPL8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.44■□□□□ 0.7
TIMMDC1Q9NPL8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.44■□□□□ 0.7
TIMMDC1Q9NPL8 MFSD11-216ENST00000590393 1141 ntBASIC19.44■□□□□ 0.7
TIMMDC1Q9NPL8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.44■□□□□ 0.7
TIMMDC1Q9NPL8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
TIMMDC1Q9NPL8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TIMMDC1Q9NPL8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TIMMDC1Q9NPL8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.44■□□□□ 0.7
TIMMDC1Q9NPL8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TIMMDC1Q9NPL8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TIMMDC1Q9NPL8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TIMMDC1Q9NPL8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TIMMDC1Q9NPL8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
TIMMDC1Q9NPL8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TIMMDC1Q9NPL8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TIMMDC1Q9NPL8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TIMMDC1Q9NPL8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms