Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRCC1Q9NPI7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.65■□□□□ 0.58
KRCC1Q9NPI7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
KRCC1Q9NPI7 AL121603.2-201ENST00000557373 2117 ntBASIC18.65■□□□□ 0.58
KRCC1Q9NPI7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRCC1Q9NPI7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
KRCC1Q9NPI7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRCC1Q9NPI7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
KRCC1Q9NPI7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
KRCC1Q9NPI7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRCC1Q9NPI7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRCC1Q9NPI7 AC010141.2-201ENST00000452426 721 ntBASIC18.65■□□□□ 0.58
KRCC1Q9NPI7 SUDS3P1-201ENST00000505831 966 ntBASIC18.65■□□□□ 0.58
KRCC1Q9NPI7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.65■□□□□ 0.58
KRCC1Q9NPI7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRCC1Q9NPI7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.65■□□□□ 0.58
KRCC1Q9NPI7 AL139246.5-201ENST00000606645 996 ntBASIC18.65■□□□□ 0.58
KRCC1Q9NPI7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRCC1Q9NPI7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRCC1Q9NPI7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.65■□□□□ 0.58
KRCC1Q9NPI7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRCC1Q9NPI7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
KRCC1Q9NPI7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
KRCC1Q9NPI7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRCC1Q9NPI7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRCC1Q9NPI7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRCC1Q9NPI7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRCC1Q9NPI7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRCC1Q9NPI7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
KRCC1Q9NPI7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
KRCC1Q9NPI7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 DUX4L2-201ENST00000561772 1275 ntBASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 MIR6084-201ENST00000622012 110 ntBASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 DUX4L6-201ENST00000626483 1275 ntBASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 DUX4L1-201ENST00000627662 1275 ntBASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 DUX4L8-201ENST00000629013 1275 ntBASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 DUX4L3-201ENST00000630187 1275 ntBASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 DUX4L7-201ENST00000630678 1275 ntBASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 DUX4L5-201ENST00000630834 1275 ntBASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
KRCC1Q9NPI7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.63■□□□□ 0.57
KRCC1Q9NPI7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
KRCC1Q9NPI7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRCC1Q9NPI7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRCC1Q9NPI7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRCC1Q9NPI7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KRCC1Q9NPI7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.63■□□□□ 0.57
KRCC1Q9NPI7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRCC1Q9NPI7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.63■□□□□ 0.57
KRCC1Q9NPI7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRCC1Q9NPI7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRCC1Q9NPI7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
KRCC1Q9NPI7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
KRCC1Q9NPI7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.63■□□□□ 0.57
KRCC1Q9NPI7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRCC1Q9NPI7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KRCC1Q9NPI7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.63■□□□□ 0.57
KRCC1Q9NPI7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.63■□□□□ 0.57
KRCC1Q9NPI7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.63■□□□□ 0.57
KRCC1Q9NPI7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KRCC1Q9NPI7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRCC1Q9NPI7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.63■□□□□ 0.57
KRCC1Q9NPI7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRCC1Q9NPI7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRCC1Q9NPI7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KRCC1Q9NPI7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KRCC1Q9NPI7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRCC1Q9NPI7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRCC1Q9NPI7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRCC1Q9NPI7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRCC1Q9NPI7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KRCC1Q9NPI7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRCC1Q9NPI7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRCC1Q9NPI7 IRS3P-201ENST00000223076 1006 ntBASIC18.62■□□□□ 0.57
KRCC1Q9NPI7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KRCC1Q9NPI7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KRCC1Q9NPI7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.62■□□□□ 0.57
KRCC1Q9NPI7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KRCC1Q9NPI7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
KRCC1Q9NPI7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRCC1Q9NPI7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KRCC1Q9NPI7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms