Protein–RNA interactions for Protein: Q9H2W1

MS4A6A, Membrane-spanning 4-domains subfamily A member 6A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6AQ9H2W1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MS4A6AQ9H2W1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC15.63■□□□□ 0.09
MS4A6AQ9H2W1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MS4A6AQ9H2W1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
MS4A6AQ9H2W1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
MS4A6AQ9H2W1 AC016769.1-201ENST00000409132 1010 ntBASIC15.63■□□□□ 0.09
MS4A6AQ9H2W1 KRT18P11-201ENST00000435214 1283 ntBASIC15.63■□□□□ 0.09
MS4A6AQ9H2W1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC15.63■□□□□ 0.09
MS4A6AQ9H2W1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC15.63■□□□□ 0.09
MS4A6AQ9H2W1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.63■□□□□ 0.09
MS4A6AQ9H2W1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC15.63■□□□□ 0.09
MS4A6AQ9H2W1 RARRES2P11-201ENST00000635158 484 ntBASIC15.63■□□□□ 0.09
MS4A6AQ9H2W1 MYCNOS-205ENST00000641950 531 ntBASIC15.63■□□□□ 0.09
MS4A6AQ9H2W1 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
MS4A6AQ9H2W1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MS4A6AQ9H2W1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC15.63■□□□□ 0.09
MS4A6AQ9H2W1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MS4A6AQ9H2W1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
MS4A6AQ9H2W1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MS4A6AQ9H2W1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
MS4A6AQ9H2W1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC15.63■□□□□ 0.09
MS4A6AQ9H2W1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 AC121338.2-201ENST00000622535 1744 ntBASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MS4A6AQ9H2W1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
MS4A6AQ9H2W1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC15.6■□□□□ 0.09
MS4A6AQ9H2W1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
MS4A6AQ9H2W1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC15.6■□□□□ 0.09
MS4A6AQ9H2W1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.6■□□□□ 0.09
MS4A6AQ9H2W1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.6■□□□□ 0.09
MS4A6AQ9H2W1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
MS4A6AQ9H2W1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MS4A6AQ9H2W1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.6■□□□□ 0.09
MS4A6AQ9H2W1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC15.6■□□□□ 0.09
MS4A6AQ9H2W1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
MS4A6AQ9H2W1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MS4A6AQ9H2W1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MS4A6AQ9H2W1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
MS4A6AQ9H2W1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
MS4A6AQ9H2W1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC15.6■□□□□ 0.09
MS4A6AQ9H2W1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MS4A6AQ9H2W1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC15.6■□□□□ 0.09
MS4A6AQ9H2W1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms