Protein–RNA interactions for Protein: Q9H2L4

TMEM60, Transmembrane protein 60, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM60Q9H2L4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
TMEM60Q9H2L4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.07■■□□□ 1.28
TMEM60Q9H2L4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TMEM60Q9H2L4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TMEM60Q9H2L4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC23.07■■□□□ 1.28
TMEM60Q9H2L4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TMEM60Q9H2L4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
TMEM60Q9H2L4 NCF1B-203ENST00000435988 1254 ntBASIC23.07■■□□□ 1.28
TMEM60Q9H2L4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.07■■□□□ 1.28
TMEM60Q9H2L4 AC083906.2-201ENST00000511578 360 ntBASIC23.07■■□□□ 1.28
TMEM60Q9H2L4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.07■■□□□ 1.28
TMEM60Q9H2L4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.07■■□□□ 1.28
TMEM60Q9H2L4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.07■■□□□ 1.28
TMEM60Q9H2L4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
TMEM60Q9H2L4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TMEM60Q9H2L4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
TMEM60Q9H2L4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
TMEM60Q9H2L4 GABARAPL3-202ENST00000624044 1851 ntBASIC23.07■■□□□ 1.28
TMEM60Q9H2L4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.07■■□□□ 1.28
TMEM60Q9H2L4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TMEM60Q9H2L4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TMEM60Q9H2L4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TMEM60Q9H2L4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TMEM60Q9H2L4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TMEM60Q9H2L4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.06■■□□□ 1.28
TMEM60Q9H2L4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TMEM60Q9H2L4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.06■■□□□ 1.28
TMEM60Q9H2L4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.06■■□□□ 1.28
TMEM60Q9H2L4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TMEM60Q9H2L4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.06■■□□□ 1.28
TMEM60Q9H2L4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.06■■□□□ 1.28
TMEM60Q9H2L4 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.06■■□□□ 1.28
TMEM60Q9H2L4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TMEM60Q9H2L4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
TMEM60Q9H2L4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TMEM60Q9H2L4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.06■■□□□ 1.28
TMEM60Q9H2L4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TMEM60Q9H2L4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
TMEM60Q9H2L4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.06■■□□□ 1.28
TMEM60Q9H2L4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
TMEM60Q9H2L4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.05■■□□□ 1.28
TMEM60Q9H2L4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.05■■□□□ 1.28
TMEM60Q9H2L4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TMEM60Q9H2L4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.05■■□□□ 1.28
TMEM60Q9H2L4 KRT18P68-201ENST00000392293 1000 ntBASIC23.05■■□□□ 1.28
TMEM60Q9H2L4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.05■■□□□ 1.28
TMEM60Q9H2L4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TMEM60Q9H2L4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.05■■□□□ 1.28
TMEM60Q9H2L4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.05■■□□□ 1.28
TMEM60Q9H2L4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.05■■□□□ 1.28
TMEM60Q9H2L4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
TMEM60Q9H2L4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TMEM60Q9H2L4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.05■■□□□ 1.28
TMEM60Q9H2L4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.05■■□□□ 1.28
TMEM60Q9H2L4 AL121832.2-201ENST00000610979 668 ntBASIC23.05■■□□□ 1.28
TMEM60Q9H2L4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.05■■□□□ 1.28
TMEM60Q9H2L4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TMEM60Q9H2L4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
TMEM60Q9H2L4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TMEM60Q9H2L4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TMEM60Q9H2L4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.05■■□□□ 1.28
TMEM60Q9H2L4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC23.05■■□□□ 1.28
TMEM60Q9H2L4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
TMEM60Q9H2L4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TMEM60Q9H2L4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TMEM60Q9H2L4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
TMEM60Q9H2L4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.04■■□□□ 1.28
TMEM60Q9H2L4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TMEM60Q9H2L4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TMEM60Q9H2L4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TMEM60Q9H2L4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TMEM60Q9H2L4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.04■■□□□ 1.28
TMEM60Q9H2L4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.04■■□□□ 1.28
TMEM60Q9H2L4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TMEM60Q9H2L4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.04■■□□□ 1.28
TMEM60Q9H2L4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.04■■□□□ 1.28
TMEM60Q9H2L4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC23.04■■□□□ 1.28
TMEM60Q9H2L4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
TMEM60Q9H2L4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TMEM60Q9H2L4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TMEM60Q9H2L4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
TMEM60Q9H2L4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TMEM60Q9H2L4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TMEM60Q9H2L4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TMEM60Q9H2L4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.03■■□□□ 1.28
TMEM60Q9H2L4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TMEM60Q9H2L4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC23.03■■□□□ 1.28
TMEM60Q9H2L4 AC092720.2-201ENST00000602388 1665 ntBASIC23.03■■□□□ 1.28
TMEM60Q9H2L4 MKRN4P-201ENST00000444706 1521 ntBASIC23.03■■□□□ 1.28
TMEM60Q9H2L4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.02■■□□□ 1.28
TMEM60Q9H2L4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TMEM60Q9H2L4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC23.02■■□□□ 1.28
TMEM60Q9H2L4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TMEM60Q9H2L4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.02■■□□□ 1.28
TMEM60Q9H2L4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
TMEM60Q9H2L4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
TMEM60Q9H2L4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.02■■□□□ 1.28
TMEM60Q9H2L4 AL512408.1-201ENST00000569378 2000 ntBASIC23.02■■□□□ 1.28
TMEM60Q9H2L4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TMEM60Q9H2L4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms