Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
VPS33BQ9H267 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
VPS33BQ9H267 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
VPS33BQ9H267 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC24.71■■□□□ 1.55
VPS33BQ9H267 P4HB-223ENST00000576390 439 ntTSL 4 BASIC24.71■■□□□ 1.55
VPS33BQ9H267 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC24.71■■□□□ 1.55
VPS33BQ9H267 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
VPS33BQ9H267 AC005363.2-201ENST00000618631 242 ntBASIC24.71■■□□□ 1.55
VPS33BQ9H267 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
VPS33BQ9H267 DECR2-212ENST00000627716 352 ntTSL 2 BASIC24.71■■□□□ 1.55
VPS33BQ9H267 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
VPS33BQ9H267 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
VPS33BQ9H267 GOLGA2P6-201ENST00000340929 2049 ntBASIC24.71■■□□□ 1.55
VPS33BQ9H267 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
VPS33BQ9H267 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
VPS33BQ9H267 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.55
VPS33BQ9H267 C1orf229-201ENST00000623686 2258 ntBASIC24.7■■□□□ 1.55
VPS33BQ9H267 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
VPS33BQ9H267 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC24.7■■□□□ 1.55
VPS33BQ9H267 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
VPS33BQ9H267 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
VPS33BQ9H267 FAM197Y1-201ENST00000421178 764 ntBASIC24.7■■□□□ 1.54
VPS33BQ9H267 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
VPS33BQ9H267 FDX2-207ENST00000494368 584 ntTSL 4 BASIC24.7■■□□□ 1.54
VPS33BQ9H267 F2R-202ENST00000505600 442 ntTSL 2 BASIC24.7■■□□□ 1.54
VPS33BQ9H267 NUDT16P1-203ENST00000513809 620 ntBASIC24.7■■□□□ 1.54
VPS33BQ9H267 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC24.7■■□□□ 1.54
VPS33BQ9H267 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC24.7■■□□□ 1.54
VPS33BQ9H267 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
VPS33BQ9H267 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.7■■□□□ 1.54
VPS33BQ9H267 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
VPS33BQ9H267 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC24.7■■□□□ 1.54
VPS33BQ9H267 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC24.69■■□□□ 1.54
VPS33BQ9H267 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC24.69■■□□□ 1.54
VPS33BQ9H267 RBM17P1-201ENST00000453646 1190 ntBASIC24.69■■□□□ 1.54
VPS33BQ9H267 AL049597.2-201ENST00000565575 961 ntBASIC24.69■■□□□ 1.54
VPS33BQ9H267 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
VPS33BQ9H267 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
VPS33BQ9H267 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC24.69■■□□□ 1.54
VPS33BQ9H267 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
VPS33BQ9H267 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
VPS33BQ9H267 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
VPS33BQ9H267 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
VPS33BQ9H267 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
VPS33BQ9H267 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC24.68■■□□□ 1.54
VPS33BQ9H267 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
VPS33BQ9H267 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
VPS33BQ9H267 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
VPS33BQ9H267 UNC93B2-201ENST00000285383 730 ntBASIC24.68■■□□□ 1.54
VPS33BQ9H267 ARMC10P1-201ENST00000313754 855 ntBASIC24.68■■□□□ 1.54
VPS33BQ9H267 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
VPS33BQ9H267 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
VPS33BQ9H267 TPM1-226ENST00000560959 925 ntTSL 2 BASIC24.68■■□□□ 1.54
VPS33BQ9H267 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC24.68■■□□□ 1.54
VPS33BQ9H267 AC004264.1-201ENST00000608354 794 ntBASIC24.68■■□□□ 1.54
VPS33BQ9H267 AL121906.2-201ENST00000621597 723 ntBASIC24.68■■□□□ 1.54
VPS33BQ9H267 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC24.68■■□□□ 1.54
VPS33BQ9H267 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.68■■□□□ 1.54
VPS33BQ9H267 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
VPS33BQ9H267 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
VPS33BQ9H267 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
VPS33BQ9H267 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
VPS33BQ9H267 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC24.67■■□□□ 1.54
VPS33BQ9H267 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
VPS33BQ9H267 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
VPS33BQ9H267 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
VPS33BQ9H267 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC24.67■■□□□ 1.54
VPS33BQ9H267 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC24.67■■□□□ 1.54
VPS33BQ9H267 MIR6786-201ENST00000616843 113 ntBASIC24.67■■□□□ 1.54
VPS33BQ9H267 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
VPS33BQ9H267 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
VPS33BQ9H267 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
VPS33BQ9H267 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
VPS33BQ9H267 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC24.66■■□□□ 1.54
VPS33BQ9H267 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC24.66■■□□□ 1.54
VPS33BQ9H267 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
VPS33BQ9H267 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC24.66■■□□□ 1.54
VPS33BQ9H267 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
VPS33BQ9H267 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC24.66■■□□□ 1.54
VPS33BQ9H267 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC24.66■■□□□ 1.54
VPS33BQ9H267 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC24.66■■□□□ 1.54
VPS33BQ9H267 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC24.66■■□□□ 1.54
VPS33BQ9H267 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
VPS33BQ9H267 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
VPS33BQ9H267 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
VPS33BQ9H267 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC24.65■■□□□ 1.54
VPS33BQ9H267 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.65■■□□□ 1.54
VPS33BQ9H267 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
VPS33BQ9H267 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
VPS33BQ9H267 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC24.65■■□□□ 1.54
VPS33BQ9H267 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC24.65■■□□□ 1.54
VPS33BQ9H267 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC24.65■■□□□ 1.54
VPS33BQ9H267 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
VPS33BQ9H267 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
VPS33BQ9H267 AC079598.2-202ENST00000546624 1451 ntBASIC24.64■■□□□ 1.54
VPS33BQ9H267 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC24.64■■□□□ 1.54
VPS33BQ9H267 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
VPS33BQ9H267 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
VPS33BQ9H267 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC24.64■■□□□ 1.54
VPS33BQ9H267 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms