Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
COMMD4Q9H0A8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.95■□□□□ 0.46
COMMD4Q9H0A8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.95■□□□□ 0.46
COMMD4Q9H0A8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.95■□□□□ 0.46
COMMD4Q9H0A8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.95■□□□□ 0.46
COMMD4Q9H0A8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD4Q9H0A8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD4Q9H0A8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.95■□□□□ 0.46
COMMD4Q9H0A8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD4Q9H0A8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.95■□□□□ 0.46
COMMD4Q9H0A8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.95■□□□□ 0.46
COMMD4Q9H0A8 EDA-201ENST00000338901 1233 ntBASIC17.95■□□□□ 0.46
COMMD4Q9H0A8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD4Q9H0A8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD4Q9H0A8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.95■□□□□ 0.46
COMMD4Q9H0A8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD4Q9H0A8 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD4Q9H0A8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD4Q9H0A8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD4Q9H0A8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD4Q9H0A8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD4Q9H0A8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD4Q9H0A8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
COMMD4Q9H0A8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD4Q9H0A8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD4Q9H0A8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD4Q9H0A8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD4Q9H0A8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD4Q9H0A8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.94■□□□□ 0.46
COMMD4Q9H0A8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD4Q9H0A8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
COMMD4Q9H0A8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD4Q9H0A8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
COMMD4Q9H0A8 AC245052.3-201ENST00000450182 901 ntBASIC17.94■□□□□ 0.46
COMMD4Q9H0A8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.94■□□□□ 0.46
COMMD4Q9H0A8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.94■□□□□ 0.46
COMMD4Q9H0A8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
COMMD4Q9H0A8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD4Q9H0A8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.94■□□□□ 0.46
COMMD4Q9H0A8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD4Q9H0A8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.93■□□□□ 0.46
COMMD4Q9H0A8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COMMD4Q9H0A8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COMMD4Q9H0A8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.93■□□□□ 0.46
COMMD4Q9H0A8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COMMD4Q9H0A8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COMMD4Q9H0A8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COMMD4Q9H0A8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.93■□□□□ 0.46
COMMD4Q9H0A8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.93■□□□□ 0.46
COMMD4Q9H0A8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
COMMD4Q9H0A8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.93■□□□□ 0.46
COMMD4Q9H0A8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.93■□□□□ 0.46
COMMD4Q9H0A8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.93■□□□□ 0.46
COMMD4Q9H0A8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COMMD4Q9H0A8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COMMD4Q9H0A8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
COMMD4Q9H0A8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
COMMD4Q9H0A8 AP001330.3-201ENST00000520123 633 ntBASIC17.92■□□□□ 0.46
COMMD4Q9H0A8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.92■□□□□ 0.46
COMMD4Q9H0A8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.92■□□□□ 0.46
COMMD4Q9H0A8 AC110285.6-201ENST00000617652 491 ntBASIC17.92■□□□□ 0.46
COMMD4Q9H0A8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COMMD4Q9H0A8 AC120498.10-201ENST00000621827 505 ntBASIC17.92■□□□□ 0.46
COMMD4Q9H0A8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.92■□□□□ 0.46
COMMD4Q9H0A8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COMMD4Q9H0A8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COMMD4Q9H0A8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COMMD4Q9H0A8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COMMD4Q9H0A8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
COMMD4Q9H0A8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COMMD4Q9H0A8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.92■□□□□ 0.46
COMMD4Q9H0A8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
COMMD4Q9H0A8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COMMD4Q9H0A8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.92■□□□□ 0.46
COMMD4Q9H0A8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COMMD4Q9H0A8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.92■□□□□ 0.46
COMMD4Q9H0A8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
COMMD4Q9H0A8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
COMMD4Q9H0A8 RASA4CP-201ENST00000424092 1398 ntBASIC17.91■□□□□ 0.46
COMMD4Q9H0A8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COMMD4Q9H0A8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.91■□□□□ 0.46
COMMD4Q9H0A8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.91■□□□□ 0.46
COMMD4Q9H0A8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
COMMD4Q9H0A8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COMMD4Q9H0A8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COMMD4Q9H0A8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.91■□□□□ 0.46
COMMD4Q9H0A8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
COMMD4Q9H0A8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.91■□□□□ 0.46
COMMD4Q9H0A8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.91■□□□□ 0.46
COMMD4Q9H0A8 AC012414.1-201ENST00000556676 535 ntBASIC17.91■□□□□ 0.46
COMMD4Q9H0A8 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.91■□□□□ 0.46
COMMD4Q9H0A8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.91■□□□□ 0.46
COMMD4Q9H0A8 AL355001.2-201ENST00000620617 1191 ntBASIC17.91■□□□□ 0.46
COMMD4Q9H0A8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
COMMD4Q9H0A8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COMMD4Q9H0A8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
COMMD4Q9H0A8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COMMD4Q9H0A8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
COMMD4Q9H0A8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.9■□□□□ 0.46
COMMD4Q9H0A8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms