Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.14■□□□□ 0.65
CPPED1Q9BRF8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.14■□□□□ 0.65
CPPED1Q9BRF8 AP001160.3-201ENST00000601484 763 ntBASIC19.14■□□□□ 0.65
CPPED1Q9BRF8 AC104187.1-201ENST00000607510 612 ntBASIC19.14■□□□□ 0.65
CPPED1Q9BRF8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CPPED1Q9BRF8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPPED1Q9BRF8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CPPED1Q9BRF8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.14■□□□□ 0.65
CPPED1Q9BRF8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPPED1Q9BRF8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPPED1Q9BRF8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.14■□□□□ 0.65
CPPED1Q9BRF8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.14■□□□□ 0.65
CPPED1Q9BRF8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPPED1Q9BRF8 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.13■□□□□ 0.65
CPPED1Q9BRF8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPPED1Q9BRF8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.13■□□□□ 0.65
CPPED1Q9BRF8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.13■□□□□ 0.65
CPPED1Q9BRF8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.13■□□□□ 0.65
CPPED1Q9BRF8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.13■□□□□ 0.65
CPPED1Q9BRF8 KRT8P36-201ENST00000489121 1440 ntBASIC19.13■□□□□ 0.65
CPPED1Q9BRF8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.13■□□□□ 0.65
CPPED1Q9BRF8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CPPED1Q9BRF8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPPED1Q9BRF8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPPED1Q9BRF8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
CPPED1Q9BRF8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPPED1Q9BRF8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPPED1Q9BRF8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPPED1Q9BRF8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.13■□□□□ 0.65
CPPED1Q9BRF8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.13■□□□□ 0.65
CPPED1Q9BRF8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CPPED1Q9BRF8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPPED1Q9BRF8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.12■□□□□ 0.65
CPPED1Q9BRF8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CPPED1Q9BRF8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.12■□□□□ 0.65
CPPED1Q9BRF8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CPPED1Q9BRF8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPPED1Q9BRF8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPPED1Q9BRF8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPPED1Q9BRF8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPPED1Q9BRF8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPPED1Q9BRF8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPPED1Q9BRF8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPPED1Q9BRF8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPPED1Q9BRF8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.12■□□□□ 0.65
CPPED1Q9BRF8 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPPED1Q9BRF8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPPED1Q9BRF8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPPED1Q9BRF8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.12■□□□□ 0.65
CPPED1Q9BRF8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPPED1Q9BRF8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.11■□□□□ 0.65
CPPED1Q9BRF8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPPED1Q9BRF8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPPED1Q9BRF8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.11■□□□□ 0.65
CPPED1Q9BRF8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.11■□□□□ 0.65
CPPED1Q9BRF8 AC091799.1-201ENST00000422823 811 ntBASIC19.11■□□□□ 0.65
CPPED1Q9BRF8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.11■□□□□ 0.65
CPPED1Q9BRF8 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.11■□□□□ 0.65
CPPED1Q9BRF8 AC142381.2-201ENST00000566120 298 ntBASIC19.11■□□□□ 0.65
CPPED1Q9BRF8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.11■□□□□ 0.65
CPPED1Q9BRF8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.11■□□□□ 0.65
CPPED1Q9BRF8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.11■□□□□ 0.65
CPPED1Q9BRF8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPPED1Q9BRF8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPPED1Q9BRF8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPPED1Q9BRF8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPPED1Q9BRF8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPPED1Q9BRF8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPPED1Q9BRF8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPPED1Q9BRF8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPPED1Q9BRF8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPPED1Q9BRF8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CPPED1Q9BRF8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.1■□□□□ 0.65
CPPED1Q9BRF8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.1■□□□□ 0.65
CPPED1Q9BRF8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CPPED1Q9BRF8 AL139246.5-201ENST00000606645 996 ntBASIC19.1■□□□□ 0.65
CPPED1Q9BRF8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CPPED1Q9BRF8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.1■□□□□ 0.65
CPPED1Q9BRF8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CPPED1Q9BRF8 DPP3P2-201ENST00000416030 1696 ntBASIC19.1■□□□□ 0.65
CPPED1Q9BRF8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CPPED1Q9BRF8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CPPED1Q9BRF8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CPPED1Q9BRF8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPPED1Q9BRF8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 LINC02228-203ENST00000641970 1355 ntBASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 AL158211.5-201ENST00000623583 2518 ntBASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms