Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CSPG4P5Q96PW8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.03■□□□□ 0.96
CSPG4P5Q96PW8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSPG4P5Q96PW8 CDCA4P2-201ENST00000441182 718 ntBASIC21.03■□□□□ 0.96
CSPG4P5Q96PW8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.03■□□□□ 0.96
CSPG4P5Q96PW8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.03■□□□□ 0.96
CSPG4P5Q96PW8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.03■□□□□ 0.96
CSPG4P5Q96PW8 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
CSPG4P5Q96PW8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSPG4P5Q96PW8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
CSPG4P5Q96PW8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.03■□□□□ 0.96
CSPG4P5Q96PW8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
CSPG4P5Q96PW8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CSPG4P5Q96PW8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSPG4P5Q96PW8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.02■□□□□ 0.96
CSPG4P5Q96PW8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSPG4P5Q96PW8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSPG4P5Q96PW8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSPG4P5Q96PW8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.02■□□□□ 0.96
CSPG4P5Q96PW8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.02■□□□□ 0.96
CSPG4P5Q96PW8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CSPG4P5Q96PW8 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.02■□□□□ 0.96
CSPG4P5Q96PW8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.02■□□□□ 0.96
CSPG4P5Q96PW8 AC069236.1-201ENST00000604339 616 ntBASIC21.02■□□□□ 0.96
CSPG4P5Q96PW8 AC005181.1-201ENST00000604782 1256 ntBASIC21.02■□□□□ 0.96
CSPG4P5Q96PW8 AL356652.1-201ENST00000615962 565 ntBASIC21.02■□□□□ 0.96
CSPG4P5Q96PW8 AC100791.3-201ENST00000617619 330 ntBASIC21.02■□□□□ 0.96
CSPG4P5Q96PW8 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSPG4P5Q96PW8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSPG4P5Q96PW8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CSPG4P5Q96PW8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.02■□□□□ 0.96
CSPG4P5Q96PW8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.02■□□□□ 0.96
CSPG4P5Q96PW8 AL162377.1-201ENST00000618844 1793 ntBASIC21.02■□□□□ 0.96
CSPG4P5Q96PW8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CSPG4P5Q96PW8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
CSPG4P5Q96PW8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.01■□□□□ 0.95
CSPG4P5Q96PW8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.01■□□□□ 0.95
CSPG4P5Q96PW8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CSPG4P5Q96PW8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CSPG4P5Q96PW8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CSPG4P5Q96PW8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSPG4P5Q96PW8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CSPG4P5Q96PW8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSPG4P5Q96PW8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSPG4P5Q96PW8 PGM5P4-201ENST00000421970 445 ntBASIC21.01■□□□□ 0.95
CSPG4P5Q96PW8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSPG4P5Q96PW8 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CSPG4P5Q96PW8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CSPG4P5Q96PW8 RAP2CP1-201ENST00000605103 478 ntBASIC21.01■□□□□ 0.95
CSPG4P5Q96PW8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CSPG4P5Q96PW8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSPG4P5Q96PW8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSPG4P5Q96PW8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
CSPG4P5Q96PW8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
CSPG4P5Q96PW8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSPG4P5Q96PW8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CSPG4P5Q96PW8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CSPG4P5Q96PW8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CSPG4P5Q96PW8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21■□□□□ 0.95
CSPG4P5Q96PW8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21■□□□□ 0.95
CSPG4P5Q96PW8 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21■□□□□ 0.95
CSPG4P5Q96PW8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21■□□□□ 0.95
CSPG4P5Q96PW8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21■□□□□ 0.95
CSPG4P5Q96PW8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSPG4P5Q96PW8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
CSPG4P5Q96PW8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CSPG4P5Q96PW8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSPG4P5Q96PW8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSPG4P5Q96PW8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21■□□□□ 0.95
CSPG4P5Q96PW8 MCRIP2P1-201ENST00000394346 511 ntBASIC21■□□□□ 0.95
CSPG4P5Q96PW8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21■□□□□ 0.95
CSPG4P5Q96PW8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21■□□□□ 0.95
CSPG4P5Q96PW8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21■□□□□ 0.95
CSPG4P5Q96PW8 AC008694.1-202ENST00000636953 945 ntBASIC21■□□□□ 0.95
CSPG4P5Q96PW8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CSPG4P5Q96PW8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21■□□□□ 0.95
CSPG4P5Q96PW8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21■□□□□ 0.95
CSPG4P5Q96PW8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21■□□□□ 0.95
CSPG4P5Q96PW8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CSPG4P5Q96PW8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSPG4P5Q96PW8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CSPG4P5Q96PW8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21■□□□□ 0.95
CSPG4P5Q96PW8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSPG4P5Q96PW8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
CSPG4P5Q96PW8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.99■□□□□ 0.95
CSPG4P5Q96PW8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
CSPG4P5Q96PW8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CSPG4P5Q96PW8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.99■□□□□ 0.95
CSPG4P5Q96PW8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSPG4P5Q96PW8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
CSPG4P5Q96PW8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CSPG4P5Q96PW8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSPG4P5Q96PW8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSPG4P5Q96PW8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.99■□□□□ 0.95
CSPG4P5Q96PW8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.99■□□□□ 0.95
CSPG4P5Q96PW8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.99■□□□□ 0.95
CSPG4P5Q96PW8 OR10C1-204ENST00000622521 1039 ntBASIC20.99■□□□□ 0.95
CSPG4P5Q96PW8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSPG4P5Q96PW8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSPG4P5Q96PW8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms