Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
C9orf72Q96LT7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.92■□□□□ 0.94
C9orf72Q96LT7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
C9orf72Q96LT7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.92■□□□□ 0.94
C9orf72Q96LT7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
C9orf72Q96LT7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
C9orf72Q96LT7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.91■□□□□ 0.94
C9orf72Q96LT7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.91■□□□□ 0.94
C9orf72Q96LT7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.91■□□□□ 0.94
C9orf72Q96LT7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
C9orf72Q96LT7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
C9orf72Q96LT7 RNF165-205ENST00000588679 2904 ntBASIC20.91■□□□□ 0.94
C9orf72Q96LT7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
C9orf72Q96LT7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.91■□□□□ 0.94
C9orf72Q96LT7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.91■□□□□ 0.94
C9orf72Q96LT7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
C9orf72Q96LT7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.91■□□□□ 0.94
C9orf72Q96LT7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C9orf72Q96LT7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C9orf72Q96LT7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
C9orf72Q96LT7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C9orf72Q96LT7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.9■□□□□ 0.94
C9orf72Q96LT7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
C9orf72Q96LT7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.9■□□□□ 0.94
C9orf72Q96LT7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C9orf72Q96LT7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
C9orf72Q96LT7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
C9orf72Q96LT7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.9■□□□□ 0.94
C9orf72Q96LT7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
C9orf72Q96LT7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
C9orf72Q96LT7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C9orf72Q96LT7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
C9orf72Q96LT7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.9■□□□□ 0.94
C9orf72Q96LT7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
C9orf72Q96LT7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.9■□□□□ 0.94
C9orf72Q96LT7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.9■□□□□ 0.94
C9orf72Q96LT7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
C9orf72Q96LT7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.9■□□□□ 0.94
C9orf72Q96LT7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C9orf72Q96LT7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C9orf72Q96LT7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
C9orf72Q96LT7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
C9orf72Q96LT7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
C9orf72Q96LT7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
C9orf72Q96LT7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
C9orf72Q96LT7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.89■□□□□ 0.94
C9orf72Q96LT7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.89■□□□□ 0.94
C9orf72Q96LT7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.89■□□□□ 0.93
C9orf72Q96LT7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.89■□□□□ 0.93
C9orf72Q96LT7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.89■□□□□ 0.93
C9orf72Q96LT7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
C9orf72Q96LT7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.89■□□□□ 0.93
C9orf72Q96LT7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.89■□□□□ 0.93
C9orf72Q96LT7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
C9orf72Q96LT7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.89■□□□□ 0.93
C9orf72Q96LT7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
C9orf72Q96LT7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
C9orf72Q96LT7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
C9orf72Q96LT7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
C9orf72Q96LT7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
C9orf72Q96LT7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
C9orf72Q96LT7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
C9orf72Q96LT7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.88■□□□□ 0.93
C9orf72Q96LT7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C9orf72Q96LT7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
C9orf72Q96LT7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
C9orf72Q96LT7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
C9orf72Q96LT7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
C9orf72Q96LT7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
C9orf72Q96LT7 RARRES2P11-201ENST00000635158 484 ntBASIC20.88■□□□□ 0.93
C9orf72Q96LT7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.88■□□□□ 0.93
C9orf72Q96LT7 AC092720.2-201ENST00000602388 1665 ntBASIC20.88■□□□□ 0.93
C9orf72Q96LT7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
C9orf72Q96LT7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C9orf72Q96LT7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.88■□□□□ 0.93
C9orf72Q96LT7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C9orf72Q96LT7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.88■□□□□ 0.93
C9orf72Q96LT7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
C9orf72Q96LT7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
C9orf72Q96LT7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
C9orf72Q96LT7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.87■□□□□ 0.93
C9orf72Q96LT7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
C9orf72Q96LT7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C9orf72Q96LT7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.87■□□□□ 0.93
C9orf72Q96LT7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.87■□□□□ 0.93
C9orf72Q96LT7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C9orf72Q96LT7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
C9orf72Q96LT7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
C9orf72Q96LT7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C9orf72Q96LT7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
C9orf72Q96LT7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.87■□□□□ 0.93
C9orf72Q96LT7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.87■□□□□ 0.93
C9orf72Q96LT7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.87■□□□□ 0.93
C9orf72Q96LT7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.87■□□□□ 0.93
C9orf72Q96LT7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
C9orf72Q96LT7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.87■□□□□ 0.93
C9orf72Q96LT7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
C9orf72Q96LT7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
C9orf72Q96LT7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
C9orf72Q96LT7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms