Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRNP40Q96DI7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNRNP40Q96DI7 AC133561.1-201ENST00000568600 2415 ntBASIC18.4■□□□□ 0.54
SNRNP40Q96DI7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SNRNP40Q96DI7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SNRNP40Q96DI7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SNRNP40Q96DI7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
SNRNP40Q96DI7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNRNP40Q96DI7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SNRNP40Q96DI7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SNRNP40Q96DI7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SNRNP40Q96DI7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNRNP40Q96DI7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNRNP40Q96DI7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.39■□□□□ 0.53
SNRNP40Q96DI7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SNRNP40Q96DI7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.39■□□□□ 0.53
SNRNP40Q96DI7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SNRNP40Q96DI7 AC026471.5-201ENST00000615068 467 ntBASIC18.39■□□□□ 0.53
SNRNP40Q96DI7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNRNP40Q96DI7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SNRNP40Q96DI7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNRNP40Q96DI7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.39■□□□□ 0.53
SNRNP40Q96DI7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNRNP40Q96DI7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.39■□□□□ 0.53
SNRNP40Q96DI7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNRNP40Q96DI7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNRNP40Q96DI7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNRNP40Q96DI7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.38■□□□□ 0.53
SNRNP40Q96DI7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.38■□□□□ 0.53
SNRNP40Q96DI7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNRNP40Q96DI7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
SNRNP40Q96DI7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNRNP40Q96DI7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNRNP40Q96DI7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNRNP40Q96DI7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNRNP40Q96DI7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
SNRNP40Q96DI7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNRNP40Q96DI7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 AP003071.4-201ENST00000562276 1284 ntBASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 AL353708.3-201ENST00000610272 989 ntBASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNRNP40Q96DI7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SNRNP40Q96DI7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRNP40Q96DI7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRNP40Q96DI7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNRNP40Q96DI7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRNP40Q96DI7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRNP40Q96DI7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNRNP40Q96DI7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRNP40Q96DI7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNRNP40Q96DI7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNRNP40Q96DI7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNRNP40Q96DI7 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.36■□□□□ 0.53
SNRNP40Q96DI7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SNRNP40Q96DI7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRNP40Q96DI7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.36■□□□□ 0.53
SNRNP40Q96DI7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNRNP40Q96DI7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRNP40Q96DI7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.36■□□□□ 0.53
SNRNP40Q96DI7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SNRNP40Q96DI7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.36■□□□□ 0.53
SNRNP40Q96DI7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
SNRNP40Q96DI7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.36■□□□□ 0.53
SNRNP40Q96DI7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.36■□□□□ 0.53
SNRNP40Q96DI7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNRNP40Q96DI7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.36■□□□□ 0.53
SNRNP40Q96DI7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.36■□□□□ 0.53
SNRNP40Q96DI7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNRNP40Q96DI7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SNRNP40Q96DI7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.35■□□□□ 0.53
SNRNP40Q96DI7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.35■□□□□ 0.53
SNRNP40Q96DI7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.35■□□□□ 0.53
SNRNP40Q96DI7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNRNP40Q96DI7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms