Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.59■□□□□ 0.73
UBE2E3Q969T4 LINC01006-201ENST00000333319 2292 ntBASIC19.59■□□□□ 0.73
UBE2E3Q969T4 AL157384.1-201ENST00000445995 2473 ntBASIC19.59■□□□□ 0.73
UBE2E3Q969T4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
UBE2E3Q969T4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
UBE2E3Q969T4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBE2E3Q969T4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
UBE2E3Q969T4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBE2E3Q969T4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBE2E3Q969T4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UBE2E3Q969T4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UBE2E3Q969T4 RARRES2P4-201ENST00000514074 484 ntBASIC19.58■□□□□ 0.72
UBE2E3Q969T4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.58■□□□□ 0.72
UBE2E3Q969T4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
UBE2E3Q969T4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.58■□□□□ 0.72
UBE2E3Q969T4 AC069236.1-201ENST00000604339 616 ntBASIC19.58■□□□□ 0.72
UBE2E3Q969T4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
UBE2E3Q969T4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBE2E3Q969T4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBE2E3Q969T4 AL121603.2-201ENST00000557373 2117 ntBASIC19.58■□□□□ 0.72
UBE2E3Q969T4 AC068338.2-201ENST00000563278 1430 ntBASIC19.58■□□□□ 0.72
UBE2E3Q969T4 AC087633.2-202ENST00000565166 1439 ntBASIC19.58■□□□□ 0.72
UBE2E3Q969T4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2E3Q969T4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
UBE2E3Q969T4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2E3Q969T4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
UBE2E3Q969T4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2E3Q969T4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
UBE2E3Q969T4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.57■□□□□ 0.72
UBE2E3Q969T4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.57■□□□□ 0.72
UBE2E3Q969T4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2E3Q969T4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
UBE2E3Q969T4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.57■□□□□ 0.72
UBE2E3Q969T4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2E3Q969T4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2E3Q969T4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2E3Q969T4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2E3Q969T4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2E3Q969T4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2E3Q969T4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2E3Q969T4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
UBE2E3Q969T4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2E3Q969T4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.56■□□□□ 0.72
UBE2E3Q969T4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
UBE2E3Q969T4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2E3Q969T4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2E3Q969T4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.56■□□□□ 0.72
UBE2E3Q969T4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2E3Q969T4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
UBE2E3Q969T4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2E3Q969T4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2E3Q969T4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2E3Q969T4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.56■□□□□ 0.72
UBE2E3Q969T4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.56■□□□□ 0.72
UBE2E3Q969T4 AC016405.3-201ENST00000607710 860 ntBASIC19.56■□□□□ 0.72
UBE2E3Q969T4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.56■□□□□ 0.72
UBE2E3Q969T4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2E3Q969T4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2E3Q969T4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2E3Q969T4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
UBE2E3Q969T4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2E3Q969T4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2E3Q969T4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2E3Q969T4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2E3Q969T4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBE2E3Q969T4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.55■□□□□ 0.72
UBE2E3Q969T4 CYP21A1P-202ENST00000354927 1481 ntBASIC19.55■□□□□ 0.72
UBE2E3Q969T4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBE2E3Q969T4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBE2E3Q969T4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
UBE2E3Q969T4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.55■□□□□ 0.72
UBE2E3Q969T4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBE2E3Q969T4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
UBE2E3Q969T4 AL137784.2-201ENST00000607332 1000 ntBASIC19.55■□□□□ 0.72
UBE2E3Q969T4 AL356652.1-201ENST00000615962 565 ntBASIC19.55■□□□□ 0.72
UBE2E3Q969T4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.55■□□□□ 0.72
UBE2E3Q969T4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.55■□□□□ 0.72
UBE2E3Q969T4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.55■□□□□ 0.72
UBE2E3Q969T4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBE2E3Q969T4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.55■□□□□ 0.72
UBE2E3Q969T4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.55■□□□□ 0.72
UBE2E3Q969T4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UBE2E3Q969T4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBE2E3Q969T4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UBE2E3Q969T4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.54■□□□□ 0.72
UBE2E3Q969T4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBE2E3Q969T4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UBE2E3Q969T4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBE2E3Q969T4 MCRIP2P1-201ENST00000394346 511 ntBASIC19.54■□□□□ 0.72
UBE2E3Q969T4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.54■□□□□ 0.72
UBE2E3Q969T4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
UBE2E3Q969T4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBE2E3Q969T4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.54■□□□□ 0.72
UBE2E3Q969T4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.54■□□□□ 0.72
UBE2E3Q969T4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBE2E3Q969T4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.53■□□□□ 0.72
UBE2E3Q969T4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBE2E3Q969T4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBE2E3Q969T4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBE2E3Q969T4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms