Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.84■■□□□ 1.25
ATP6V0A1Q93050 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
ATP6V0A1Q93050 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
ATP6V0A1Q93050 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
ATP6V0A1Q93050 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.84■■□□□ 1.25
ATP6V0A1Q93050 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
ATP6V0A1Q93050 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
ATP6V0A1Q93050 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.84■■□□□ 1.25
ATP6V0A1Q93050 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
ATP6V0A1Q93050 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.84■■□□□ 1.25
ATP6V0A1Q93050 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.84■■□□□ 1.25
ATP6V0A1Q93050 PKD1P6-201ENST00000343738 4769 ntBASIC22.84■■□□□ 1.25
ATP6V0A1Q93050 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.83■■□□□ 1.25
ATP6V0A1Q93050 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.83■■□□□ 1.25
ATP6V0A1Q93050 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
ATP6V0A1Q93050 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
ATP6V0A1Q93050 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.83■■□□□ 1.25
ATP6V0A1Q93050 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
ATP6V0A1Q93050 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.83■■□□□ 1.25
ATP6V0A1Q93050 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.83■■□□□ 1.25
ATP6V0A1Q93050 RPS2P4-201ENST00000476944 856 ntBASIC22.83■■□□□ 1.25
ATP6V0A1Q93050 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
ATP6V0A1Q93050 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.83■■□□□ 1.25
ATP6V0A1Q93050 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.82■■□□□ 1.24
ATP6V0A1Q93050 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
ATP6V0A1Q93050 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
ATP6V0A1Q93050 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ATP6V0A1Q93050 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.82■■□□□ 1.24
ATP6V0A1Q93050 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
ATP6V0A1Q93050 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
ATP6V0A1Q93050 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
ATP6V0A1Q93050 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
ATP6V0A1Q93050 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.82■■□□□ 1.24
ATP6V0A1Q93050 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ATP6V0A1Q93050 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
ATP6V0A1Q93050 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.82■■□□□ 1.24
ATP6V0A1Q93050 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.82■■□□□ 1.24
ATP6V0A1Q93050 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
ATP6V0A1Q93050 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.82■■□□□ 1.24
ATP6V0A1Q93050 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
ATP6V0A1Q93050 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
ATP6V0A1Q93050 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.82■■□□□ 1.24
ATP6V0A1Q93050 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
ATP6V0A1Q93050 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ATP6V0A1Q93050 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
ATP6V0A1Q93050 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.81■■□□□ 1.24
ATP6V0A1Q93050 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ATP6V0A1Q93050 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
ATP6V0A1Q93050 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.81■■□□□ 1.24
ATP6V0A1Q93050 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
ATP6V0A1Q93050 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.81■■□□□ 1.24
ATP6V0A1Q93050 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
ATP6V0A1Q93050 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.81■■□□□ 1.24
ATP6V0A1Q93050 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
ATP6V0A1Q93050 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
ATP6V0A1Q93050 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.81■■□□□ 1.24
ATP6V0A1Q93050 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ATP6V0A1Q93050 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.81■■□□□ 1.24
ATP6V0A1Q93050 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.8■■□□□ 1.24
ATP6V0A1Q93050 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
ATP6V0A1Q93050 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.8■■□□□ 1.24
ATP6V0A1Q93050 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
ATP6V0A1Q93050 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
ATP6V0A1Q93050 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
ATP6V0A1Q93050 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
ATP6V0A1Q93050 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
ATP6V0A1Q93050 KRT17P3-201ENST00000420566 1262 ntBASIC22.8■■□□□ 1.24
ATP6V0A1Q93050 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC22.8■■□□□ 1.24
ATP6V0A1Q93050 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
ATP6V0A1Q93050 OR2A1-AS1-207ENST00000486094 819 ntBASIC22.8■■□□□ 1.24
ATP6V0A1Q93050 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.8■■□□□ 1.24
ATP6V0A1Q93050 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.8■■□□□ 1.24
ATP6V0A1Q93050 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.8■■□□□ 1.24
ATP6V0A1Q93050 AL359736.2-201ENST00000621992 437 ntBASIC22.8■■□□□ 1.24
ATP6V0A1Q93050 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
ATP6V0A1Q93050 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
ATP6V0A1Q93050 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ATP6V0A1Q93050 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
ATP6V0A1Q93050 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ATP6V0A1Q93050 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ATP6V0A1Q93050 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
ATP6V0A1Q93050 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
ATP6V0A1Q93050 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ATP6V0A1Q93050 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.79■■□□□ 1.24
ATP6V0A1Q93050 AL596275.1-201ENST00000423464 877 ntBASIC22.79■■□□□ 1.24
ATP6V0A1Q93050 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.79■■□□□ 1.24
ATP6V0A1Q93050 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.79■■□□□ 1.24
ATP6V0A1Q93050 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ATP6V0A1Q93050 C2orf69P4-201ENST00000565394 541 ntBASIC22.79■■□□□ 1.24
ATP6V0A1Q93050 SOX15-203ENST00000570788 1093 ntBASIC22.79■■□□□ 1.24
ATP6V0A1Q93050 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.79■■□□□ 1.24
ATP6V0A1Q93050 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
ATP6V0A1Q93050 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ATP6V0A1Q93050 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
ATP6V0A1Q93050 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.78■■□□□ 1.24
ATP6V0A1Q93050 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
ATP6V0A1Q93050 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.78■■□□□ 1.24
ATP6V0A1Q93050 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
ATP6V0A1Q93050 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
ATP6V0A1Q93050 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms