Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RTF1Q92541 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RTF1Q92541 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RTF1Q92541 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
RTF1Q92541 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC26.63■■□□□ 1.85
RTF1Q92541 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC26.63■■□□□ 1.85
RTF1Q92541 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC26.63■■□□□ 1.85
RTF1Q92541 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC26.63■■□□□ 1.85
RTF1Q92541 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC26.63■■□□□ 1.85
RTF1Q92541 AC066615.1-201ENST00000640911 628 ntBASIC26.63■■□□□ 1.85
RTF1Q92541 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
RTF1Q92541 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
RTF1Q92541 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RTF1Q92541 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RTF1Q92541 STK25-205ENST00000405883 1904 ntTSL 2 BASIC26.63■■□□□ 1.85
RTF1Q92541 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RTF1Q92541 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
RTF1Q92541 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RTF1Q92541 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RTF1Q92541 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RTF1Q92541 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
RTF1Q92541 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC26.62■■□□□ 1.85
RTF1Q92541 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RTF1Q92541 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RTF1Q92541 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RTF1Q92541 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RTF1Q92541 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC26.62■■□□□ 1.85
RTF1Q92541 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RTF1Q92541 MMD2-204ENST00000612910 778 ntTSL 5 BASIC26.62■■□□□ 1.85
RTF1Q92541 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC26.62■■□□□ 1.85
RTF1Q92541 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC26.62■■□□□ 1.85
RTF1Q92541 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
RTF1Q92541 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
RTF1Q92541 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
RTF1Q92541 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC26.61■■□□□ 1.85
RTF1Q92541 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RTF1Q92541 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RTF1Q92541 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC26.61■■□□□ 1.85
RTF1Q92541 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RTF1Q92541 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
RTF1Q92541 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC26.61■■□□□ 1.85
RTF1Q92541 AC098590.1-201ENST00000468126 897 ntBASIC26.61■■□□□ 1.85
RTF1Q92541 SERP1-205ENST00000487153 657 ntTSL 4 BASIC26.61■■□□□ 1.85
RTF1Q92541 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC26.61■■□□□ 1.85
RTF1Q92541 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC26.61■■□□□ 1.85
RTF1Q92541 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC26.61■■□□□ 1.85
RTF1Q92541 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC26.61■■□□□ 1.85
RTF1Q92541 KRT8P36-201ENST00000489121 1440 ntBASIC26.61■■□□□ 1.85
RTF1Q92541 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RTF1Q92541 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RTF1Q92541 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RTF1Q92541 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
RTF1Q92541 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RTF1Q92541 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
RTF1Q92541 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RTF1Q92541 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RTF1Q92541 GGT1-206ENST00000404223 952 ntTSL 2 BASIC26.6■■□□□ 1.85
RTF1Q92541 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
RTF1Q92541 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC26.6■■□□□ 1.85
RTF1Q92541 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC26.6■■□□□ 1.85
RTF1Q92541 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RTF1Q92541 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RTF1Q92541 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RTF1Q92541 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
RTF1Q92541 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RTF1Q92541 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC26.6■■□□□ 1.85
RTF1Q92541 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC26.6■■□□□ 1.85
RTF1Q92541 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC26.6■■□□□ 1.85
RTF1Q92541 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RTF1Q92541 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RTF1Q92541 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RTF1Q92541 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC26.59■■□□□ 1.85
RTF1Q92541 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RTF1Q92541 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RTF1Q92541 KRT17P3-201ENST00000420566 1262 ntBASIC26.59■■□□□ 1.85
RTF1Q92541 AC026310.3-201ENST00000625186 2373 ntBASIC26.59■■□□□ 1.85
RTF1Q92541 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RTF1Q92541 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RTF1Q92541 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
RTF1Q92541 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC26.58■■□□□ 1.85
RTF1Q92541 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
RTF1Q92541 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RTF1Q92541 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
RTF1Q92541 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RTF1Q92541 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC26.58■■□□□ 1.85
RTF1Q92541 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RTF1Q92541 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RTF1Q92541 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RTF1Q92541 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RTF1Q92541 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RTF1Q92541 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC26.58■■□□□ 1.85
RTF1Q92541 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RTF1Q92541 PKD1P6-201ENST00000343738 4769 ntBASIC26.58■■□□□ 1.84
RTF1Q92541 PLK5-205ENST00000642079 1969 ntBASIC26.57■■□□□ 1.84
RTF1Q92541 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RTF1Q92541 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
RTF1Q92541 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RTF1Q92541 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RTF1Q92541 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RTF1Q92541 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms