Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
U2AF1L4Q8WU68 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.32■■□□□ 1.32
U2AF1L4Q8WU68 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
U2AF1L4Q8WU68 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
U2AF1L4Q8WU68 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
U2AF1L4Q8WU68 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
U2AF1L4Q8WU68 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.32■■□□□ 1.32
U2AF1L4Q8WU68 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
U2AF1L4Q8WU68 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
U2AF1L4Q8WU68 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
U2AF1L4Q8WU68 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
U2AF1L4Q8WU68 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
U2AF1L4Q8WU68 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.32■■□□□ 1.32
U2AF1L4Q8WU68 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC23.32■■□□□ 1.32
U2AF1L4Q8WU68 PRKY-204ENST00000533551 1019 ntBASIC23.32■■□□□ 1.32
U2AF1L4Q8WU68 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC23.32■■□□□ 1.32
U2AF1L4Q8WU68 AL590326.2-201ENST00000625139 305 ntBASIC23.32■■□□□ 1.32
U2AF1L4Q8WU68 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
U2AF1L4Q8WU68 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.32■■□□□ 1.32
U2AF1L4Q8WU68 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
U2AF1L4Q8WU68 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
U2AF1L4Q8WU68 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
U2AF1L4Q8WU68 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
U2AF1L4Q8WU68 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
U2AF1L4Q8WU68 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC23.31■■□□□ 1.32
U2AF1L4Q8WU68 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC23.31■■□□□ 1.32
U2AF1L4Q8WU68 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC23.31■■□□□ 1.32
U2AF1L4Q8WU68 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
U2AF1L4Q8WU68 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
U2AF1L4Q8WU68 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC23.31■■□□□ 1.32
U2AF1L4Q8WU68 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
U2AF1L4Q8WU68 AL353708.3-201ENST00000610272 989 ntBASIC23.31■■□□□ 1.32
U2AF1L4Q8WU68 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.31■■□□□ 1.32
U2AF1L4Q8WU68 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
U2AF1L4Q8WU68 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.31■■□□□ 1.32
U2AF1L4Q8WU68 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
U2AF1L4Q8WU68 PKD1P6-201ENST00000343738 4769 ntBASIC23.31■■□□□ 1.32
U2AF1L4Q8WU68 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
U2AF1L4Q8WU68 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 AL049597.2-201ENST00000565575 961 ntBASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
U2AF1L4Q8WU68 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
U2AF1L4Q8WU68 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.29■■□□□ 1.32
U2AF1L4Q8WU68 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
U2AF1L4Q8WU68 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
U2AF1L4Q8WU68 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
U2AF1L4Q8WU68 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
U2AF1L4Q8WU68 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
U2AF1L4Q8WU68 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
U2AF1L4Q8WU68 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC23.29■■□□□ 1.32
U2AF1L4Q8WU68 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC23.29■■□□□ 1.32
U2AF1L4Q8WU68 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.29■■□□□ 1.32
U2AF1L4Q8WU68 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
U2AF1L4Q8WU68 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
U2AF1L4Q8WU68 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
U2AF1L4Q8WU68 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.29■■□□□ 1.32
U2AF1L4Q8WU68 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
U2AF1L4Q8WU68 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
U2AF1L4Q8WU68 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
U2AF1L4Q8WU68 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
U2AF1L4Q8WU68 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.28■■□□□ 1.32
U2AF1L4Q8WU68 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.28■■□□□ 1.32
U2AF1L4Q8WU68 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.28■■□□□ 1.32
U2AF1L4Q8WU68 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
U2AF1L4Q8WU68 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
U2AF1L4Q8WU68 RARRES2P10-201ENST00000564312 460 ntBASIC23.28■■□□□ 1.32
U2AF1L4Q8WU68 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
U2AF1L4Q8WU68 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
U2AF1L4Q8WU68 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
U2AF1L4Q8WU68 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.27■■□□□ 1.32
U2AF1L4Q8WU68 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms