Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.42■■□□□ 1.02
SHKBP1Q8TBC3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHKBP1Q8TBC3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
SHKBP1Q8TBC3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
SHKBP1Q8TBC3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHKBP1Q8TBC3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.42■■□□□ 1.02
SHKBP1Q8TBC3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
SHKBP1Q8TBC3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHKBP1Q8TBC3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.42■■□□□ 1.02
SHKBP1Q8TBC3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHKBP1Q8TBC3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.42■■□□□ 1.02
SHKBP1Q8TBC3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.42■■□□□ 1.02
SHKBP1Q8TBC3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.42■■□□□ 1.02
SHKBP1Q8TBC3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
SHKBP1Q8TBC3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.42■■□□□ 1.02
SHKBP1Q8TBC3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SHKBP1Q8TBC3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 KRT17P3-201ENST00000420566 1262 ntBASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 UBE2SP1-201ENST00000450587 669 ntBASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 RPPH1-201ENST00000516869 333 ntBASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
SHKBP1Q8TBC3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.4■■□□□ 1.02
SHKBP1Q8TBC3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHKBP1Q8TBC3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SHKBP1Q8TBC3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHKBP1Q8TBC3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
SHKBP1Q8TBC3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHKBP1Q8TBC3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SHKBP1Q8TBC3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHKBP1Q8TBC3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHKBP1Q8TBC3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
SHKBP1Q8TBC3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
SHKBP1Q8TBC3 AC008550.1-201ENST00000511500 884 ntBASIC21.4■■□□□ 1.02
SHKBP1Q8TBC3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.4■■□□□ 1.02
SHKBP1Q8TBC3 C1QBPP2-201ENST00000528754 825 ntBASIC21.4■■□□□ 1.02
SHKBP1Q8TBC3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.4■■□□□ 1.02
SHKBP1Q8TBC3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.4■■□□□ 1.02
SHKBP1Q8TBC3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.4■■□□□ 1.02
SHKBP1Q8TBC3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SHKBP1Q8TBC3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SHKBP1Q8TBC3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHKBP1Q8TBC3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
SHKBP1Q8TBC3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SHKBP1Q8TBC3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
SHKBP1Q8TBC3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
SHKBP1Q8TBC3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SHKBP1Q8TBC3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
SHKBP1Q8TBC3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SHKBP1Q8TBC3 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.39■■□□□ 1.01
SHKBP1Q8TBC3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SHKBP1Q8TBC3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.39■■□□□ 1.01
SHKBP1Q8TBC3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.39■■□□□ 1.01
SHKBP1Q8TBC3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.39■■□□□ 1.01
SHKBP1Q8TBC3 RN7SL471P-201ENST00000580476 299 ntBASIC21.39■■□□□ 1.01
SHKBP1Q8TBC3 AC069544.1-201ENST00000609399 999 ntBASIC21.39■■□□□ 1.01
SHKBP1Q8TBC3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SHKBP1Q8TBC3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.39■■□□□ 1.01
SHKBP1Q8TBC3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.39■■□□□ 1.01
SHKBP1Q8TBC3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SHKBP1Q8TBC3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
SHKBP1Q8TBC3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SHKBP1Q8TBC3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.39■■□□□ 1.01
SHKBP1Q8TBC3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.39■■□□□ 1.01
SHKBP1Q8TBC3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
SHKBP1Q8TBC3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SHKBP1Q8TBC3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SHKBP1Q8TBC3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHKBP1Q8TBC3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHKBP1Q8TBC3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.38■■□□□ 1.01
SHKBP1Q8TBC3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.38■■□□□ 1.01
SHKBP1Q8TBC3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
SHKBP1Q8TBC3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.38■■□□□ 1.01
SHKBP1Q8TBC3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHKBP1Q8TBC3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.38■■□□□ 1.01
SHKBP1Q8TBC3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SHKBP1Q8TBC3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms