Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC24.19■■□□□ 1.46
NKX2-3Q8TAU0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC24.19■■□□□ 1.46
NKX2-3Q8TAU0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
NKX2-3Q8TAU0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC24.19■■□□□ 1.46
NKX2-3Q8TAU0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
NKX2-3Q8TAU0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
NKX2-3Q8TAU0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
NKX2-3Q8TAU0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
NKX2-3Q8TAU0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
NKX2-3Q8TAU0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
NKX2-3Q8TAU0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
NKX2-3Q8TAU0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC24.18■■□□□ 1.46
NKX2-3Q8TAU0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC24.18■■□□□ 1.46
NKX2-3Q8TAU0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
NKX2-3Q8TAU0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NKX2-3Q8TAU0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NKX2-3Q8TAU0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NKX2-3Q8TAU0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
NKX2-3Q8TAU0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
NKX2-3Q8TAU0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
NKX2-3Q8TAU0 AC091874.3-201ENST00000512672 1195 ntBASIC24.18■■□□□ 1.46
NKX2-3Q8TAU0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC24.18■■□□□ 1.46
NKX2-3Q8TAU0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC24.18■■□□□ 1.46
NKX2-3Q8TAU0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC24.18■■□□□ 1.46
NKX2-3Q8TAU0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC24.18■■□□□ 1.46
NKX2-3Q8TAU0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC24.18■■□□□ 1.46
NKX2-3Q8TAU0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC24.18■■□□□ 1.46
NKX2-3Q8TAU0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC24.18■■□□□ 1.46
NKX2-3Q8TAU0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC24.18■■□□□ 1.46
NKX2-3Q8TAU0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NKX2-3Q8TAU0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC24.18■■□□□ 1.46
NKX2-3Q8TAU0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC24.18■■□□□ 1.46
NKX2-3Q8TAU0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC24.18■■□□□ 1.46
NKX2-3Q8TAU0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC24.18■■□□□ 1.46
NKX2-3Q8TAU0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NKX2-3Q8TAU0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
NKX2-3Q8TAU0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC24.18■■□□□ 1.46
NKX2-3Q8TAU0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC24.17■■□□□ 1.46
NKX2-3Q8TAU0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
NKX2-3Q8TAU0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NKX2-3Q8TAU0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC24.17■■□□□ 1.46
NKX2-3Q8TAU0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NKX2-3Q8TAU0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
NKX2-3Q8TAU0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NKX2-3Q8TAU0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
NKX2-3Q8TAU0 ECEL1P3-201ENST00000427961 737 ntBASIC24.17■■□□□ 1.46
NKX2-3Q8TAU0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC24.17■■□□□ 1.46
NKX2-3Q8TAU0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NKX2-3Q8TAU0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
NKX2-3Q8TAU0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NKX2-3Q8TAU0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC24.17■■□□□ 1.46
NKX2-3Q8TAU0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NKX2-3Q8TAU0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC24.17■■□□□ 1.46
NKX2-3Q8TAU0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC24.17■■□□□ 1.46
NKX2-3Q8TAU0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC24.17■■□□□ 1.46
NKX2-3Q8TAU0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NKX2-3Q8TAU0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NKX2-3Q8TAU0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
NKX2-3Q8TAU0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
NKX2-3Q8TAU0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
NKX2-3Q8TAU0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC24.16■■□□□ 1.46
NKX2-3Q8TAU0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC24.16■■□□□ 1.46
NKX2-3Q8TAU0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
NKX2-3Q8TAU0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NKX2-3Q8TAU0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC24.16■■□□□ 1.46
NKX2-3Q8TAU0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NKX2-3Q8TAU0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NKX2-3Q8TAU0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
NKX2-3Q8TAU0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
NKX2-3Q8TAU0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC24.16■■□□□ 1.46
NKX2-3Q8TAU0 OR2A1-AS1-201ENST00000462305 773 ntBASIC24.16■■□□□ 1.46
NKX2-3Q8TAU0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC24.16■■□□□ 1.46
NKX2-3Q8TAU0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
NKX2-3Q8TAU0 AC073648.6-201ENST00000641589 218 ntBASIC24.16■■□□□ 1.46
NKX2-3Q8TAU0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
NKX2-3Q8TAU0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC24.16■■□□□ 1.46
NKX2-3Q8TAU0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC24.16■■□□□ 1.46
NKX2-3Q8TAU0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NKX2-3Q8TAU0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
NKX2-3Q8TAU0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NKX2-3Q8TAU0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC24.15■■□□□ 1.46
NKX2-3Q8TAU0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NKX2-3Q8TAU0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC24.15■■□□□ 1.46
NKX2-3Q8TAU0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NKX2-3Q8TAU0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC24.15■■□□□ 1.46
NKX2-3Q8TAU0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
NKX2-3Q8TAU0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC24.15■■□□□ 1.46
NKX2-3Q8TAU0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC24.15■■□□□ 1.46
NKX2-3Q8TAU0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NKX2-3Q8TAU0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC24.15■■□□□ 1.46
NKX2-3Q8TAU0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NKX2-3Q8TAU0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NKX2-3Q8TAU0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC24.14■■□□□ 1.46
NKX2-3Q8TAU0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC24.14■■□□□ 1.46
NKX2-3Q8TAU0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
NKX2-3Q8TAU0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
NKX2-3Q8TAU0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
NKX2-3Q8TAU0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
NKX2-3Q8TAU0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
NKX2-3Q8TAU0 UNC93B5-201ENST00000530315 699 ntBASIC24.14■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms