Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP61Q8NHU2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CFAP61Q8NHU2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP61Q8NHU2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.53■□□□□ 0.88
CFAP61Q8NHU2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP61Q8NHU2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP61Q8NHU2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CFAP61Q8NHU2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.53■□□□□ 0.88
CFAP61Q8NHU2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.53■□□□□ 0.88
CFAP61Q8NHU2 AC010141.2-201ENST00000452426 721 ntBASIC20.53■□□□□ 0.88
CFAP61Q8NHU2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.53■□□□□ 0.88
CFAP61Q8NHU2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
CFAP61Q8NHU2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP61Q8NHU2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP61Q8NHU2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CFAP61Q8NHU2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP61Q8NHU2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP61Q8NHU2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.53■□□□□ 0.88
CFAP61Q8NHU2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP61Q8NHU2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP61Q8NHU2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP61Q8NHU2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.53■□□□□ 0.88
CFAP61Q8NHU2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP61Q8NHU2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP61Q8NHU2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP61Q8NHU2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP61Q8NHU2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.52■□□□□ 0.88
CFAP61Q8NHU2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CFAP61Q8NHU2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP61Q8NHU2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP61Q8NHU2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
CFAP61Q8NHU2 AP005212.1-201ENST00000581547 1997 ntBASIC20.52■□□□□ 0.87
CFAP61Q8NHU2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP61Q8NHU2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP61Q8NHU2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP61Q8NHU2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP61Q8NHU2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP61Q8NHU2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP61Q8NHU2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.51■□□□□ 0.87
CFAP61Q8NHU2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.51■□□□□ 0.87
CFAP61Q8NHU2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.51■□□□□ 0.87
CFAP61Q8NHU2 SLC7A5P2-201ENST00000553010 536 ntBASIC20.51■□□□□ 0.87
CFAP61Q8NHU2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.51■□□□□ 0.87
CFAP61Q8NHU2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP61Q8NHU2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP61Q8NHU2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP61Q8NHU2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
CFAP61Q8NHU2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP61Q8NHU2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP61Q8NHU2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP61Q8NHU2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP61Q8NHU2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CFAP61Q8NHU2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
CFAP61Q8NHU2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CFAP61Q8NHU2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CFAP61Q8NHU2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.5■□□□□ 0.87
CFAP61Q8NHU2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CFAP61Q8NHU2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CFAP61Q8NHU2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CFAP61Q8NHU2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.5■□□□□ 0.87
CFAP61Q8NHU2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.5■□□□□ 0.87
CFAP61Q8NHU2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CFAP61Q8NHU2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CFAP61Q8NHU2 POU5F1P4-201ENST00000413175 1085 ntBASIC20.5■□□□□ 0.87
CFAP61Q8NHU2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.5■□□□□ 0.87
CFAP61Q8NHU2 AC137761.2-201ENST00000561729 223 ntBASIC20.5■□□□□ 0.87
CFAP61Q8NHU2 AC145350.3-201ENST00000569033 163 ntBASIC20.5■□□□□ 0.87
CFAP61Q8NHU2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.5■□□□□ 0.87
CFAP61Q8NHU2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.5■□□□□ 0.87
CFAP61Q8NHU2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CFAP61Q8NHU2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CFAP61Q8NHU2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
CFAP61Q8NHU2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CFAP61Q8NHU2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CFAP61Q8NHU2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CFAP61Q8NHU2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CFAP61Q8NHU2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CFAP61Q8NHU2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CFAP61Q8NHU2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CFAP61Q8NHU2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CFAP61Q8NHU2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.49■□□□□ 0.87
CFAP61Q8NHU2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.49■□□□□ 0.87
CFAP61Q8NHU2 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.49■□□□□ 0.87
CFAP61Q8NHU2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.49■□□□□ 0.87
CFAP61Q8NHU2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.49■□□□□ 0.87
CFAP61Q8NHU2 AC120498.10-201ENST00000621827 505 ntBASIC20.49■□□□□ 0.87
CFAP61Q8NHU2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CFAP61Q8NHU2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CFAP61Q8NHU2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.49■□□□□ 0.87
CFAP61Q8NHU2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.49■□□□□ 0.87
CFAP61Q8NHU2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CFAP61Q8NHU2 PCDHAC2-203ENST00000615316 3011 ntBASIC20.48■□□□□ 0.87
CFAP61Q8NHU2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CFAP61Q8NHU2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.48■□□□□ 0.87
CFAP61Q8NHU2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CFAP61Q8NHU2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CFAP61Q8NHU2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CFAP61Q8NHU2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CFAP61Q8NHU2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CFAP61Q8NHU2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms