Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RTL9Q8NET4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RTL9Q8NET4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC25.19■■□□□ 1.62
RTL9Q8NET4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC25.19■■□□□ 1.62
RTL9Q8NET4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RTL9Q8NET4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RTL9Q8NET4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
RTL9Q8NET4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
RTL9Q8NET4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RTL9Q8NET4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RTL9Q8NET4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC25.18■■□□□ 1.62
RTL9Q8NET4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC25.18■■□□□ 1.62
RTL9Q8NET4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC25.18■■□□□ 1.62
RTL9Q8NET4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RTL9Q8NET4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RTL9Q8NET4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RTL9Q8NET4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC25.18■■□□□ 1.62
RTL9Q8NET4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RTL9Q8NET4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
RTL9Q8NET4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC25.18■■□□□ 1.62
RTL9Q8NET4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC25.18■■□□□ 1.62
RTL9Q8NET4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RTL9Q8NET4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC25.18■■□□□ 1.62
RTL9Q8NET4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC25.18■■□□□ 1.62
RTL9Q8NET4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RTL9Q8NET4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RTL9Q8NET4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC25.18■■□□□ 1.62
RTL9Q8NET4 EP400NL-214ENST00000641289 2402 ntBASIC25.18■■□□□ 1.62
RTL9Q8NET4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RTL9Q8NET4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RTL9Q8NET4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC25.18■■□□□ 1.62
RTL9Q8NET4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC25.18■■□□□ 1.62
RTL9Q8NET4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RTL9Q8NET4 AL024507.2-201ENST00000606070 2574 ntBASIC25.17■■□□□ 1.62
RTL9Q8NET4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC25.17■■□□□ 1.62
RTL9Q8NET4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RTL9Q8NET4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
RTL9Q8NET4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RTL9Q8NET4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RTL9Q8NET4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RTL9Q8NET4 FBXW4P1-201ENST00000426721 2239 ntBASIC25.17■■□□□ 1.62
RTL9Q8NET4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC25.17■■□□□ 1.62
RTL9Q8NET4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
RTL9Q8NET4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC25.17■■□□□ 1.62
RTL9Q8NET4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC25.17■■□□□ 1.62
RTL9Q8NET4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC25.17■■□□□ 1.62
RTL9Q8NET4 SNORA78-201ENST00000459373 127 ntBASIC25.17■■□□□ 1.62
RTL9Q8NET4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RTL9Q8NET4 AC023632.3-201ENST00000521633 145 ntBASIC25.17■■□□□ 1.62
RTL9Q8NET4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC25.17■■□□□ 1.62
RTL9Q8NET4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
RTL9Q8NET4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC25.17■■□□□ 1.62
RTL9Q8NET4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC25.16■■□□□ 1.62
RTL9Q8NET4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RTL9Q8NET4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RTL9Q8NET4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC25.16■■□□□ 1.62
RTL9Q8NET4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RTL9Q8NET4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RTL9Q8NET4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC25.16■■□□□ 1.62
RTL9Q8NET4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
RTL9Q8NET4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
RTL9Q8NET4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RTL9Q8NET4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC25.16■■□□□ 1.62
RTL9Q8NET4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RTL9Q8NET4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC25.16■■□□□ 1.62
RTL9Q8NET4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC25.16■■□□□ 1.62
RTL9Q8NET4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC25.16■■□□□ 1.62
RTL9Q8NET4 AC124016.1-201ENST00000609552 612 ntBASIC25.16■■□□□ 1.62
RTL9Q8NET4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RTL9Q8NET4 AC006557.6-201ENST00000623071 864 ntBASIC25.16■■□□□ 1.62
RTL9Q8NET4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
RTL9Q8NET4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RTL9Q8NET4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
RTL9Q8NET4 BID-212ENST00000614949 1988 ntTSL 5 BASIC25.15■■□□□ 1.62
RTL9Q8NET4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTL9Q8NET4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTL9Q8NET4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RTL9Q8NET4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RTL9Q8NET4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
RTL9Q8NET4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RTL9Q8NET4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RTL9Q8NET4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
RTL9Q8NET4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTL9Q8NET4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RTL9Q8NET4 ECEL1P3-201ENST00000427961 737 ntBASIC25.15■■□□□ 1.62
RTL9Q8NET4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC25.15■■□□□ 1.62
RTL9Q8NET4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC25.15■■□□□ 1.62
RTL9Q8NET4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC25.15■■□□□ 1.62
RTL9Q8NET4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTL9Q8NET4 AC073912.3-201ENST00000624414 853 ntBASIC25.15■■□□□ 1.62
RTL9Q8NET4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC25.15■■□□□ 1.62
RTL9Q8NET4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RTL9Q8NET4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTL9Q8NET4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTL9Q8NET4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC25.15■■□□□ 1.62
RTL9Q8NET4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTL9Q8NET4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTL9Q8NET4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
RTL9Q8NET4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RTL9Q8NET4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC25.14■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms