Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC38A9Q8NBW4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC38A9Q8NBW4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC38A9Q8NBW4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC38A9Q8NBW4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC38A9Q8NBW4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
SLC38A9Q8NBW4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC38A9Q8NBW4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC38A9Q8NBW4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC38A9Q8NBW4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC38A9Q8NBW4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
SLC38A9Q8NBW4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC38A9Q8NBW4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SLC38A9Q8NBW4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC38A9Q8NBW4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC38A9Q8NBW4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SLC38A9Q8NBW4 AC027702.1-201ENST00000563810 1770 ntBASIC19.24■□□□□ 0.67
SLC38A9Q8NBW4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC38A9Q8NBW4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC38A9Q8NBW4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC38A9Q8NBW4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC38A9Q8NBW4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC38A9Q8NBW4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
SLC38A9Q8NBW4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC38A9Q8NBW4 RPPH1-201ENST00000516869 333 ntBASIC19.24■□□□□ 0.67
SLC38A9Q8NBW4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.24■□□□□ 0.67
SLC38A9Q8NBW4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.24■□□□□ 0.67
SLC38A9Q8NBW4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.24■□□□□ 0.67
SLC38A9Q8NBW4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SLC38A9Q8NBW4 RN7SL471P-201ENST00000580476 299 ntBASIC19.24■□□□□ 0.67
SLC38A9Q8NBW4 AC069544.1-201ENST00000609399 999 ntBASIC19.24■□□□□ 0.67
SLC38A9Q8NBW4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.24■□□□□ 0.67
SLC38A9Q8NBW4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SLC38A9Q8NBW4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC38A9Q8NBW4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC38A9Q8NBW4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC38A9Q8NBW4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC38A9Q8NBW4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC38A9Q8NBW4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC38A9Q8NBW4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC38A9Q8NBW4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC38A9Q8NBW4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC38A9Q8NBW4 FEM1AP4-201ENST00000443167 1987 ntBASIC19.23■□□□□ 0.67
SLC38A9Q8NBW4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC38A9Q8NBW4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.23■□□□□ 0.67
SLC38A9Q8NBW4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC38A9Q8NBW4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC38A9Q8NBW4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SLC38A9Q8NBW4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC38A9Q8NBW4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SLC38A9Q8NBW4 POM121L13P-201ENST00000422362 380 ntBASIC19.23■□□□□ 0.67
SLC38A9Q8NBW4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC38A9Q8NBW4 C1QBPP2-201ENST00000528754 825 ntBASIC19.23■□□□□ 0.67
SLC38A9Q8NBW4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.23■□□□□ 0.67
SLC38A9Q8NBW4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC38A9Q8NBW4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SLC38A9Q8NBW4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC38A9Q8NBW4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC38A9Q8NBW4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC38A9Q8NBW4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC38A9Q8NBW4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC38A9Q8NBW4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC38A9Q8NBW4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.23■□□□□ 0.67
SLC38A9Q8NBW4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC38A9Q8NBW4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC38A9Q8NBW4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC38A9Q8NBW4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC38A9Q8NBW4 AF106564.1-201ENST00000607058 2553 ntBASIC19.22■□□□□ 0.67
SLC38A9Q8NBW4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC38A9Q8NBW4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC38A9Q8NBW4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SLC38A9Q8NBW4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC38A9Q8NBW4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC38A9Q8NBW4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC38A9Q8NBW4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.22■□□□□ 0.67
SLC38A9Q8NBW4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC38A9Q8NBW4 AC005829.2-201ENST00000571422 1056 ntBASIC19.22■□□□□ 0.67
SLC38A9Q8NBW4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC38A9Q8NBW4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC38A9Q8NBW4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC38A9Q8NBW4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC38A9Q8NBW4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC38A9Q8NBW4 AC006557.6-201ENST00000623071 864 ntBASIC19.22■□□□□ 0.67
SLC38A9Q8NBW4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SLC38A9Q8NBW4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC38A9Q8NBW4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC38A9Q8NBW4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC38A9Q8NBW4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC38A9Q8NBW4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC38A9Q8NBW4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC38A9Q8NBW4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC38A9Q8NBW4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC38A9Q8NBW4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC38A9Q8NBW4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC38A9Q8NBW4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC38A9Q8NBW4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC38A9Q8NBW4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC38A9Q8NBW4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC38A9Q8NBW4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.21■□□□□ 0.67
SLC38A9Q8NBW4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms