Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COMMD1Q8N668 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COMMD1Q8N668 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.85■□□□□ 0.29
COMMD1Q8N668 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COMMD1Q8N668 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.84■□□□□ 0.29
COMMD1Q8N668 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COMMD1Q8N668 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.84■□□□□ 0.29
COMMD1Q8N668 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.84■□□□□ 0.29
COMMD1Q8N668 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.84■□□□□ 0.29
COMMD1Q8N668 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.84■□□□□ 0.29
COMMD1Q8N668 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COMMD1Q8N668 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COMMD1Q8N668 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COMMD1Q8N668 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
COMMD1Q8N668 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.84■□□□□ 0.29
COMMD1Q8N668 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.84■□□□□ 0.29
COMMD1Q8N668 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.84■□□□□ 0.29
COMMD1Q8N668 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COMMD1Q8N668 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COMMD1Q8N668 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COMMD1Q8N668 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COMMD1Q8N668 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COMMD1Q8N668 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COMMD1Q8N668 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
COMMD1Q8N668 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
COMMD1Q8N668 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
COMMD1Q8N668 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COMMD1Q8N668 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
COMMD1Q8N668 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COMMD1Q8N668 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.83■□□□□ 0.28
COMMD1Q8N668 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COMMD1Q8N668 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.83■□□□□ 0.28
COMMD1Q8N668 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COMMD1Q8N668 AC079140.4-201ENST00000507448 529 ntBASIC16.83■□□□□ 0.28
COMMD1Q8N668 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.83■□□□□ 0.28
COMMD1Q8N668 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
COMMD1Q8N668 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.82■□□□□ 0.28
COMMD1Q8N668 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.82■□□□□ 0.28
COMMD1Q8N668 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.82■□□□□ 0.28
COMMD1Q8N668 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.82■□□□□ 0.28
COMMD1Q8N668 AC005224.4-201ENST00000583262 1652 ntBASIC16.82■□□□□ 0.28
COMMD1Q8N668 AC006128.1-201ENST00000624704 1661 ntBASIC16.82■□□□□ 0.28
COMMD1Q8N668 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.82■□□□□ 0.28
COMMD1Q8N668 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD1Q8N668 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD1Q8N668 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD1Q8N668 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.82■□□□□ 0.28
COMMD1Q8N668 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.82■□□□□ 0.28
COMMD1Q8N668 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD1Q8N668 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.82■□□□□ 0.28
COMMD1Q8N668 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD1Q8N668 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD1Q8N668 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD1Q8N668 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD1Q8N668 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
COMMD1Q8N668 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD1Q8N668 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD1Q8N668 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
COMMD1Q8N668 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD1Q8N668 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD1Q8N668 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD1Q8N668 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD1Q8N668 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD1Q8N668 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.81■□□□□ 0.28
COMMD1Q8N668 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD1Q8N668 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
COMMD1Q8N668 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD1Q8N668 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD1Q8N668 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD1Q8N668 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD1Q8N668 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD1Q8N668 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.81■□□□□ 0.28
COMMD1Q8N668 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.81■□□□□ 0.28
COMMD1Q8N668 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
COMMD1Q8N668 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.81■□□□□ 0.28
COMMD1Q8N668 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.81■□□□□ 0.28
COMMD1Q8N668 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD1Q8N668 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.81■□□□□ 0.28
COMMD1Q8N668 AL137784.2-201ENST00000607332 1000 ntBASIC16.81■□□□□ 0.28
COMMD1Q8N668 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
COMMD1Q8N668 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD1Q8N668 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD1Q8N668 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD1Q8N668 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD1Q8N668 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
COMMD1Q8N668 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.81■□□□□ 0.28
COMMD1Q8N668 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
COMMD1Q8N668 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD1Q8N668 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
COMMD1Q8N668 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD1Q8N668 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD1Q8N668 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD1Q8N668 AC098818.2-201ENST00000564925 2320 ntBASIC16.8■□□□□ 0.28
COMMD1Q8N668 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD1Q8N668 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD1Q8N668 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
COMMD1Q8N668 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
COMMD1Q8N668 KRT19P1-201ENST00000405746 1186 ntBASIC16.8■□□□□ 0.28
COMMD1Q8N668 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
COMMD1Q8N668 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms