Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.67■■□□□ 1.06
TTC39CQ8N584 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.67■■□□□ 1.06
TTC39CQ8N584 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.67■■□□□ 1.06
TTC39CQ8N584 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.67■■□□□ 1.06
TTC39CQ8N584 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.67■■□□□ 1.06
TTC39CQ8N584 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.67■■□□□ 1.06
TTC39CQ8N584 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TTC39CQ8N584 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.67■■□□□ 1.06
TTC39CQ8N584 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.67■■□□□ 1.06
TTC39CQ8N584 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TTC39CQ8N584 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.67■■□□□ 1.06
TTC39CQ8N584 AL121603.2-201ENST00000557373 2117 ntBASIC21.67■■□□□ 1.06
TTC39CQ8N584 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.67■■□□□ 1.06
TTC39CQ8N584 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TTC39CQ8N584 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TTC39CQ8N584 AC092720.2-201ENST00000602388 1665 ntBASIC21.66■■□□□ 1.06
TTC39CQ8N584 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TTC39CQ8N584 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
TTC39CQ8N584 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
TTC39CQ8N584 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TTC39CQ8N584 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.66■■□□□ 1.06
TTC39CQ8N584 AC142086.2-201ENST00000569753 217 ntBASIC21.66■■□□□ 1.06
TTC39CQ8N584 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
TTC39CQ8N584 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.66■■□□□ 1.06
TTC39CQ8N584 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.66■■□□□ 1.06
TTC39CQ8N584 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
TTC39CQ8N584 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
TTC39CQ8N584 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TTC39CQ8N584 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.66■■□□□ 1.06
TTC39CQ8N584 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TTC39CQ8N584 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TTC39CQ8N584 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TTC39CQ8N584 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TTC39CQ8N584 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TTC39CQ8N584 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TTC39CQ8N584 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TTC39CQ8N584 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TTC39CQ8N584 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TTC39CQ8N584 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.65■■□□□ 1.06
TTC39CQ8N584 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.65■■□□□ 1.06
TTC39CQ8N584 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TTC39CQ8N584 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TTC39CQ8N584 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TTC39CQ8N584 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.65■■□□□ 1.06
TTC39CQ8N584 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TTC39CQ8N584 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TTC39CQ8N584 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.65■■□□□ 1.06
TTC39CQ8N584 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
TTC39CQ8N584 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.65■■□□□ 1.06
TTC39CQ8N584 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TTC39CQ8N584 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TTC39CQ8N584 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TTC39CQ8N584 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TTC39CQ8N584 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
TTC39CQ8N584 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
TTC39CQ8N584 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.64■■□□□ 1.05
TTC39CQ8N584 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.64■■□□□ 1.05
TTC39CQ8N584 C2orf69P4-201ENST00000565394 541 ntBASIC21.64■■□□□ 1.05
TTC39CQ8N584 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TTC39CQ8N584 AC133041.1-202ENST00000642053 222 ntBASIC21.64■■□□□ 1.05
TTC39CQ8N584 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TTC39CQ8N584 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
TTC39CQ8N584 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.64■■□□□ 1.05
TTC39CQ8N584 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TTC39CQ8N584 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TTC39CQ8N584 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TTC39CQ8N584 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TTC39CQ8N584 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TTC39CQ8N584 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
TTC39CQ8N584 HLA-L-209ENST00000420110 1011 ntBASIC21.63■■□□□ 1.05
TTC39CQ8N584 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.63■■□□□ 1.05
TTC39CQ8N584 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
TTC39CQ8N584 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.63■■□□□ 1.05
TTC39CQ8N584 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.63■■□□□ 1.05
TTC39CQ8N584 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.63■■□□□ 1.05
TTC39CQ8N584 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TTC39CQ8N584 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TTC39CQ8N584 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TTC39CQ8N584 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TTC39CQ8N584 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.63■■□□□ 1.05
TTC39CQ8N584 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
TTC39CQ8N584 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.63■■□□□ 1.05
TTC39CQ8N584 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.62■■□□□ 1.05
TTC39CQ8N584 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TTC39CQ8N584 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
TTC39CQ8N584 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TTC39CQ8N584 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.62■■□□□ 1.05
TTC39CQ8N584 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.62■■□□□ 1.05
TTC39CQ8N584 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TTC39CQ8N584 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.62■■□□□ 1.05
TTC39CQ8N584 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
TTC39CQ8N584 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.62■■□□□ 1.05
TTC39CQ8N584 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.62■■□□□ 1.05
TTC39CQ8N584 AL138781.1-201ENST00000566567 1274 ntBASIC21.62■■□□□ 1.05
TTC39CQ8N584 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TTC39CQ8N584 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TTC39CQ8N584 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TTC39CQ8N584 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
TTC39CQ8N584 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.62■■□□□ 1.05
TTC39CQ8N584 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms