Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
XRN1Q8IZH2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
XRN1Q8IZH2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
XRN1Q8IZH2 TERF1P1-201ENST00000311003 1181 ntBASIC28.57■■■□□ 2.16
XRN1Q8IZH2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC28.57■■■□□ 2.16
XRN1Q8IZH2 AC005521.1-201ENST00000393351 872 ntBASIC28.57■■■□□ 2.16
XRN1Q8IZH2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC28.57■■■□□ 2.16
XRN1Q8IZH2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC28.57■■■□□ 2.16
XRN1Q8IZH2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
XRN1Q8IZH2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
XRN1Q8IZH2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
XRN1Q8IZH2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
XRN1Q8IZH2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC28.57■■■□□ 2.16
XRN1Q8IZH2 NBPF21P-201ENST00000425093 1451 ntBASIC28.57■■■□□ 2.16
XRN1Q8IZH2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
XRN1Q8IZH2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC28.56■■■□□ 2.16
XRN1Q8IZH2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC28.56■■■□□ 2.16
XRN1Q8IZH2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
XRN1Q8IZH2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
XRN1Q8IZH2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
XRN1Q8IZH2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC28.56■■■□□ 2.16
XRN1Q8IZH2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC28.56■■■□□ 2.16
XRN1Q8IZH2 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
XRN1Q8IZH2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC28.56■■■□□ 2.16
XRN1Q8IZH2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
XRN1Q8IZH2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC28.56■■■□□ 2.16
XRN1Q8IZH2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
XRN1Q8IZH2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC28.56■■■□□ 2.16
XRN1Q8IZH2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC28.55■■■□□ 2.16
XRN1Q8IZH2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
XRN1Q8IZH2 NME3-204ENST00000563498 920 ntTSL 2 BASIC28.55■■■□□ 2.16
XRN1Q8IZH2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC28.55■■■□□ 2.16
XRN1Q8IZH2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
XRN1Q8IZH2 AL031963.3-201ENST00000606441 850 ntBASIC28.55■■■□□ 2.16
XRN1Q8IZH2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
XRN1Q8IZH2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
XRN1Q8IZH2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC28.55■■■□□ 2.16
XRN1Q8IZH2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
XRN1Q8IZH2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC28.55■■■□□ 2.16
XRN1Q8IZH2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
XRN1Q8IZH2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
XRN1Q8IZH2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC28.55■■■□□ 2.16
XRN1Q8IZH2 AL390955.1-201ENST00000428694 934 ntBASIC28.55■■■□□ 2.16
XRN1Q8IZH2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC28.55■■■□□ 2.16
XRN1Q8IZH2 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
XRN1Q8IZH2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC28.55■■■□□ 2.16
XRN1Q8IZH2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC28.55■■■□□ 2.16
XRN1Q8IZH2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
XRN1Q8IZH2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
XRN1Q8IZH2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
XRN1Q8IZH2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
XRN1Q8IZH2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
XRN1Q8IZH2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC28.54■■■□□ 2.16
XRN1Q8IZH2 AC023632.3-201ENST00000521633 145 ntBASIC28.54■■■□□ 2.16
XRN1Q8IZH2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC28.54■■■□□ 2.16
XRN1Q8IZH2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC28.54■■■□□ 2.16
XRN1Q8IZH2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC28.54■■■□□ 2.16
XRN1Q8IZH2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
XRN1Q8IZH2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC28.54■■■□□ 2.16
XRN1Q8IZH2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
XRN1Q8IZH2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
XRN1Q8IZH2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC28.53■■■□□ 2.16
XRN1Q8IZH2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
XRN1Q8IZH2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
XRN1Q8IZH2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
XRN1Q8IZH2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
XRN1Q8IZH2 UNC93B2-201ENST00000285383 730 ntBASIC28.52■■■□□ 2.16
XRN1Q8IZH2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
XRN1Q8IZH2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
XRN1Q8IZH2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
XRN1Q8IZH2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
XRN1Q8IZH2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC28.52■■■□□ 2.16
XRN1Q8IZH2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
XRN1Q8IZH2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
XRN1Q8IZH2 AC073508.3-201ENST00000619697 1419 ntBASIC28.52■■■□□ 2.16
XRN1Q8IZH2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC28.52■■■□□ 2.16
XRN1Q8IZH2 AC073195.1-201ENST00000607241 877 ntBASIC28.52■■■□□ 2.16
XRN1Q8IZH2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.16
XRN1Q8IZH2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
XRN1Q8IZH2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
XRN1Q8IZH2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
XRN1Q8IZH2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC28.51■■■□□ 2.15
XRN1Q8IZH2 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC28.51■■■□□ 2.15
XRN1Q8IZH2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC28.51■■■□□ 2.15
XRN1Q8IZH2 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC28.51■■■□□ 2.15
XRN1Q8IZH2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
XRN1Q8IZH2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
XRN1Q8IZH2 C1orf229-201ENST00000623686 2258 ntBASIC28.51■■■□□ 2.15
XRN1Q8IZH2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
XRN1Q8IZH2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC28.51■■■□□ 2.15
XRN1Q8IZH2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
XRN1Q8IZH2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
XRN1Q8IZH2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC28.5■■■□□ 2.15
XRN1Q8IZH2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
XRN1Q8IZH2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC28.5■■■□□ 2.15
XRN1Q8IZH2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
XRN1Q8IZH2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC28.5■■■□□ 2.15
XRN1Q8IZH2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC28.49■■■□□ 2.15
XRN1Q8IZH2 SLC25A3P1-201ENST00000443844 931 ntBASIC28.49■■■□□ 2.15
XRN1Q8IZH2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC28.49■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms