Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHPFQ8IZ52 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.77■□□□□ 0.91
CHPFQ8IZ52 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CHPFQ8IZ52 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.77■□□□□ 0.91
CHPFQ8IZ52 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHPFQ8IZ52 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.76■□□□□ 0.91
CHPFQ8IZ52 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHPFQ8IZ52 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHPFQ8IZ52 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHPFQ8IZ52 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHPFQ8IZ52 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.76■□□□□ 0.91
CHPFQ8IZ52 AC008550.1-201ENST00000511500 884 ntBASIC20.76■□□□□ 0.91
CHPFQ8IZ52 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.76■□□□□ 0.91
CHPFQ8IZ52 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.76■□□□□ 0.91
CHPFQ8IZ52 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.76■□□□□ 0.91
CHPFQ8IZ52 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHPFQ8IZ52 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHPFQ8IZ52 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.76■□□□□ 0.91
CHPFQ8IZ52 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CHPFQ8IZ52 AL024507.2-201ENST00000606070 2574 ntBASIC20.76■□□□□ 0.91
CHPFQ8IZ52 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.76■□□□□ 0.91
CHPFQ8IZ52 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
CHPFQ8IZ52 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHPFQ8IZ52 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CHPFQ8IZ52 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHPFQ8IZ52 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.75■□□□□ 0.91
CHPFQ8IZ52 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.75■□□□□ 0.91
CHPFQ8IZ52 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.75■□□□□ 0.91
CHPFQ8IZ52 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHPFQ8IZ52 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHPFQ8IZ52 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
CHPFQ8IZ52 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CHPFQ8IZ52 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHPFQ8IZ52 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.75■□□□□ 0.91
CHPFQ8IZ52 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CHPFQ8IZ52 AL596275.1-201ENST00000423464 877 ntBASIC20.75■□□□□ 0.91
CHPFQ8IZ52 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.75■□□□□ 0.91
CHPFQ8IZ52 AC233263.1-201ENST00000578059 224 ntBASIC20.75■□□□□ 0.91
CHPFQ8IZ52 AC069544.1-201ENST00000609399 999 ntBASIC20.75■□□□□ 0.91
CHPFQ8IZ52 AL137060.1-201ENST00000618151 2648 ntBASIC20.75■□□□□ 0.91
CHPFQ8IZ52 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CHPFQ8IZ52 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.75■□□□□ 0.91
CHPFQ8IZ52 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.75■□□□□ 0.91
CHPFQ8IZ52 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHPFQ8IZ52 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHPFQ8IZ52 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.75■□□□□ 0.91
CHPFQ8IZ52 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHPFQ8IZ52 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHPFQ8IZ52 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CHPFQ8IZ52 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.74■□□□□ 0.91
CHPFQ8IZ52 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.74■□□□□ 0.91
CHPFQ8IZ52 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CHPFQ8IZ52 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.74■□□□□ 0.91
CHPFQ8IZ52 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHPFQ8IZ52 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.74■□□□□ 0.91
CHPFQ8IZ52 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHPFQ8IZ52 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHPFQ8IZ52 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.74■□□□□ 0.91
CHPFQ8IZ52 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHPFQ8IZ52 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.74■□□□□ 0.91
CHPFQ8IZ52 RN7SL471P-201ENST00000580476 299 ntBASIC20.74■□□□□ 0.91
CHPFQ8IZ52 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHPFQ8IZ52 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHPFQ8IZ52 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CHPFQ8IZ52 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHPFQ8IZ52 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CHPFQ8IZ52 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHPFQ8IZ52 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.73■□□□□ 0.91
CHPFQ8IZ52 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHPFQ8IZ52 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHPFQ8IZ52 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHPFQ8IZ52 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CHPFQ8IZ52 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CHPFQ8IZ52 POM121L13P-201ENST00000422362 380 ntBASIC20.73■□□□□ 0.91
CHPFQ8IZ52 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHPFQ8IZ52 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.73■□□□□ 0.91
CHPFQ8IZ52 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.73■□□□□ 0.91
CHPFQ8IZ52 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
CHPFQ8IZ52 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.73■□□□□ 0.91
CHPFQ8IZ52 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.73■□□□□ 0.91
CHPFQ8IZ52 AL356652.1-201ENST00000615962 565 ntBASIC20.73■□□□□ 0.91
CHPFQ8IZ52 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.73■□□□□ 0.91
CHPFQ8IZ52 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHPFQ8IZ52 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHPFQ8IZ52 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.73■□□□□ 0.91
CHPFQ8IZ52 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHPFQ8IZ52 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CHPFQ8IZ52 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CHPFQ8IZ52 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHPFQ8IZ52 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHPFQ8IZ52 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.72■□□□□ 0.91
CHPFQ8IZ52 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHPFQ8IZ52 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHPFQ8IZ52 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
CHPFQ8IZ52 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.72■□□□□ 0.91
CHPFQ8IZ52 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CHPFQ8IZ52 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.72■□□□□ 0.91
CHPFQ8IZ52 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHPFQ8IZ52 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CHPFQ8IZ52 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms