Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF440Q8IYI8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF440Q8IYI8 AC092667.1-201ENST00000434301 2586 ntBASIC18.61■□□□□ 0.57
ZNF440Q8IYI8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF440Q8IYI8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF440Q8IYI8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ZNF440Q8IYI8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF440Q8IYI8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF440Q8IYI8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF440Q8IYI8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF440Q8IYI8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF440Q8IYI8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNF440Q8IYI8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF440Q8IYI8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.61■□□□□ 0.57
ZNF440Q8IYI8 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF440Q8IYI8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.61■□□□□ 0.57
ZNF440Q8IYI8 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF440Q8IYI8 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF440Q8IYI8 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF440Q8IYI8 AC100791.3-201ENST00000617619 330 ntBASIC18.61■□□□□ 0.57
ZNF440Q8IYI8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF440Q8IYI8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF440Q8IYI8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ZNF440Q8IYI8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF440Q8IYI8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF440Q8IYI8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF440Q8IYI8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF440Q8IYI8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ZNF440Q8IYI8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ZNF440Q8IYI8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF440Q8IYI8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF440Q8IYI8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF440Q8IYI8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF440Q8IYI8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF440Q8IYI8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
ZNF440Q8IYI8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF440Q8IYI8 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF440Q8IYI8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ZNF440Q8IYI8 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.6■□□□□ 0.57
ZNF440Q8IYI8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.6■□□□□ 0.57
ZNF440Q8IYI8 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.6■□□□□ 0.57
ZNF440Q8IYI8 AC231657.2-201ENST00000624556 255 ntBASIC18.6■□□□□ 0.57
ZNF440Q8IYI8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF440Q8IYI8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF440Q8IYI8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.6■□□□□ 0.57
ZNF440Q8IYI8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF440Q8IYI8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
ZNF440Q8IYI8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF440Q8IYI8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF440Q8IYI8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 CYP21A1P-202ENST00000354927 1481 ntBASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 CNN2P6-201ENST00000439038 900 ntBASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 RARRES2P4-201ENST00000514074 484 ntBASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 AL356652.1-201ENST00000615962 565 ntBASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 AL162377.1-201ENST00000618844 1793 ntBASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF440Q8IYI8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
ZNF440Q8IYI8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF440Q8IYI8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF440Q8IYI8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF440Q8IYI8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF440Q8IYI8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF440Q8IYI8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF440Q8IYI8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
ZNF440Q8IYI8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF440Q8IYI8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF440Q8IYI8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.58■□□□□ 0.57
ZNF440Q8IYI8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF440Q8IYI8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
ZNF440Q8IYI8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.58■□□□□ 0.56
ZNF440Q8IYI8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms