Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.83■□□□□ 0.61
VRK2Q86Y07 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
VRK2Q86Y07 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.83■□□□□ 0.61
VRK2Q86Y07 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
VRK2Q86Y07 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.83■□□□□ 0.61
VRK2Q86Y07 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VRK2Q86Y07 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VRK2Q86Y07 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
VRK2Q86Y07 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
VRK2Q86Y07 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.83■□□□□ 0.6
VRK2Q86Y07 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.83■□□□□ 0.6
VRK2Q86Y07 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.83■□□□□ 0.6
VRK2Q86Y07 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.83■□□□□ 0.6
VRK2Q86Y07 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.83■□□□□ 0.6
VRK2Q86Y07 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
VRK2Q86Y07 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.83■□□□□ 0.6
VRK2Q86Y07 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
VRK2Q86Y07 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.83■□□□□ 0.6
VRK2Q86Y07 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.83■□□□□ 0.6
VRK2Q86Y07 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VRK2Q86Y07 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VRK2Q86Y07 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VRK2Q86Y07 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.82■□□□□ 0.6
VRK2Q86Y07 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VRK2Q86Y07 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
VRK2Q86Y07 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VRK2Q86Y07 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VRK2Q86Y07 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VRK2Q86Y07 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
VRK2Q86Y07 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VRK2Q86Y07 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VRK2Q86Y07 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.82■□□□□ 0.6
VRK2Q86Y07 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VRK2Q86Y07 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.82■□□□□ 0.6
VRK2Q86Y07 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
VRK2Q86Y07 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.82■□□□□ 0.6
VRK2Q86Y07 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VRK2Q86Y07 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.82■□□□□ 0.6
VRK2Q86Y07 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VRK2Q86Y07 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.82■□□□□ 0.6
VRK2Q86Y07 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VRK2Q86Y07 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
VRK2Q86Y07 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VRK2Q86Y07 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VRK2Q86Y07 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.81■□□□□ 0.6
VRK2Q86Y07 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.81■□□□□ 0.6
VRK2Q86Y07 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VRK2Q86Y07 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VRK2Q86Y07 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VRK2Q86Y07 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.81■□□□□ 0.6
VRK2Q86Y07 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VRK2Q86Y07 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.81■□□□□ 0.6
VRK2Q86Y07 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VRK2Q86Y07 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
VRK2Q86Y07 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VRK2Q86Y07 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.81■□□□□ 0.6
VRK2Q86Y07 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.81■□□□□ 0.6
VRK2Q86Y07 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
VRK2Q86Y07 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.81■□□□□ 0.6
VRK2Q86Y07 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
VRK2Q86Y07 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VRK2Q86Y07 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.81■□□□□ 0.6
VRK2Q86Y07 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VRK2Q86Y07 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VRK2Q86Y07 AFG3L1P-217ENST00000557444 2447 ntBASIC18.8■□□□□ 0.6
VRK2Q86Y07 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.8■□□□□ 0.6
VRK2Q86Y07 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VRK2Q86Y07 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VRK2Q86Y07 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.8■□□□□ 0.6
VRK2Q86Y07 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.8■□□□□ 0.6
VRK2Q86Y07 CDV3P1-201ENST00000471403 739 ntBASIC18.8■□□□□ 0.6
VRK2Q86Y07 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.8■□□□□ 0.6
VRK2Q86Y07 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
VRK2Q86Y07 SMG8-203ENST00000578922 2178 ntBASIC18.8■□□□□ 0.6
VRK2Q86Y07 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
VRK2Q86Y07 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.8■□□□□ 0.6
VRK2Q86Y07 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.8■□□□□ 0.6
VRK2Q86Y07 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
VRK2Q86Y07 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.8■□□□□ 0.6
VRK2Q86Y07 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.8■□□□□ 0.6
VRK2Q86Y07 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.8■□□□□ 0.6
VRK2Q86Y07 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
VRK2Q86Y07 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VRK2Q86Y07 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VRK2Q86Y07 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.79■□□□□ 0.6
VRK2Q86Y07 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
VRK2Q86Y07 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VRK2Q86Y07 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.79■□□□□ 0.6
VRK2Q86Y07 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.79■□□□□ 0.6
VRK2Q86Y07 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.79■□□□□ 0.6
VRK2Q86Y07 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VRK2Q86Y07 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.79■□□□□ 0.6
VRK2Q86Y07 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
VRK2Q86Y07 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.79■□□□□ 0.6
VRK2Q86Y07 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.79■□□□□ 0.6
VRK2Q86Y07 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.79■□□□□ 0.6
VRK2Q86Y07 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
VRK2Q86Y07 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VRK2Q86Y07 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
VRK2Q86Y07 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms