Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC003957.1-201ENST00000625108 2673 ntBASIC13.4□□□□□ -0.26
SCXQ7RTU7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCXQ7RTU7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC13.4□□□□□ -0.26
SCXQ7RTU7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCXQ7RTU7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCXQ7RTU7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC13.4□□□□□ -0.26
SCXQ7RTU7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SCXQ7RTU7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC13.39□□□□□ -0.27
SCXQ7RTU7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SCXQ7RTU7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SCXQ7RTU7 AL157384.1-201ENST00000445995 2473 ntBASIC13.39□□□□□ -0.27
SCXQ7RTU7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SCXQ7RTU7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
SCXQ7RTU7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SCXQ7RTU7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC13.39□□□□□ -0.27
SCXQ7RTU7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC13.39□□□□□ -0.27
SCXQ7RTU7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SCXQ7RTU7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
SCXQ7RTU7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC13.39□□□□□ -0.27
SCXQ7RTU7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SCXQ7RTU7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SCXQ7RTU7 AC069152.1-201ENST00000438030 544 ntBASIC13.39□□□□□ -0.27
SCXQ7RTU7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC13.39□□□□□ -0.27
SCXQ7RTU7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC13.39□□□□□ -0.27
SCXQ7RTU7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC13.39□□□□□ -0.27
SCXQ7RTU7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SCXQ7RTU7 KRT18P6-201ENST00000555540 1265 ntBASIC13.39□□□□□ -0.27
SCXQ7RTU7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC13.39□□□□□ -0.27
SCXQ7RTU7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC13.39□□□□□ -0.27
SCXQ7RTU7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC13.39□□□□□ -0.27
SCXQ7RTU7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
SCXQ7RTU7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC13.39□□□□□ -0.27
SCXQ7RTU7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SCXQ7RTU7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC13.39□□□□□ -0.27
SCXQ7RTU7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
SCXQ7RTU7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SCXQ7RTU7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SCXQ7RTU7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SCXQ7RTU7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SCXQ7RTU7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SCXQ7RTU7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SCXQ7RTU7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SCXQ7RTU7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SCXQ7RTU7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SCXQ7RTU7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SCXQ7RTU7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SCXQ7RTU7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SCXQ7RTU7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SCXQ7RTU7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
SCXQ7RTU7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC13.38□□□□□ -0.27
SCXQ7RTU7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SCXQ7RTU7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC13.38□□□□□ -0.27
SCXQ7RTU7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC13.38□□□□□ -0.27
SCXQ7RTU7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC13.38□□□□□ -0.27
SCXQ7RTU7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC13.38□□□□□ -0.27
SCXQ7RTU7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC13.38□□□□□ -0.27
SCXQ7RTU7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SCXQ7RTU7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SCXQ7RTU7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SCXQ7RTU7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SCXQ7RTU7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SCXQ7RTU7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SCXQ7RTU7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SCXQ7RTU7 AC068338.2-201ENST00000563278 1430 ntBASIC13.38□□□□□ -0.27
SCXQ7RTU7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SCXQ7RTU7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SCXQ7RTU7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SCXQ7RTU7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SCXQ7RTU7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SCXQ7RTU7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SCXQ7RTU7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC13.37□□□□□ -0.27
SCXQ7RTU7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SCXQ7RTU7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SCXQ7RTU7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SCXQ7RTU7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC13.37□□□□□ -0.27
SCXQ7RTU7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SCXQ7RTU7 POU5F1P4-201ENST00000413175 1085 ntBASIC13.37□□□□□ -0.27
SCXQ7RTU7 TSPY20P-201ENST00000450910 630 ntBASIC13.37□□□□□ -0.27
SCXQ7RTU7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SCXQ7RTU7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC13.37□□□□□ -0.27
SCXQ7RTU7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SCXQ7RTU7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC13.37□□□□□ -0.27
SCXQ7RTU7 AC007322.4-201ENST00000509611 723 ntBASIC13.37□□□□□ -0.27
SCXQ7RTU7 AC098934.4-201ENST00000564127 592 ntBASIC13.37□□□□□ -0.27
SCXQ7RTU7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC13.37□□□□□ -0.27
SCXQ7RTU7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.37□□□□□ -0.27
SCXQ7RTU7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SCXQ7RTU7 AC008694.1-202ENST00000636953 945 ntBASIC13.37□□□□□ -0.27
SCXQ7RTU7 AC133041.1-202ENST00000642053 222 ntBASIC13.37□□□□□ -0.27
SCXQ7RTU7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
SCXQ7RTU7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SCXQ7RTU7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SCXQ7RTU7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC13.37□□□□□ -0.27
SCXQ7RTU7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SCXQ7RTU7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SCXQ7RTU7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC13.37□□□□□ -0.27
SCXQ7RTU7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SCXQ7RTU7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SCXQ7RTU7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SCXQ7RTU7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms