Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.4■□□□□ 0.86
RAPH1Q70E73 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RAPH1Q70E73 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAPH1Q70E73 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAPH1Q70E73 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RAPH1Q70E73 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RAPH1Q70E73 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAPH1Q70E73 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.4■□□□□ 0.86
RAPH1Q70E73 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RAPH1Q70E73 LINC02228-203ENST00000641970 1355 ntBASIC20.4■□□□□ 0.86
RAPH1Q70E73 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RAPH1Q70E73 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RAPH1Q70E73 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
RAPH1Q70E73 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAPH1Q70E73 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAPH1Q70E73 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.39■□□□□ 0.85
RAPH1Q70E73 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAPH1Q70E73 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.39■□□□□ 0.85
RAPH1Q70E73 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.39■□□□□ 0.85
RAPH1Q70E73 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.39■□□□□ 0.85
RAPH1Q70E73 AC112907.3-201ENST00000577781 2400 ntBASIC20.39■□□□□ 0.85
RAPH1Q70E73 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
RAPH1Q70E73 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.39■□□□□ 0.85
RAPH1Q70E73 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAPH1Q70E73 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAPH1Q70E73 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAPH1Q70E73 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAPH1Q70E73 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.39■□□□□ 0.85
RAPH1Q70E73 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.39■□□□□ 0.85
RAPH1Q70E73 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.38■□□□□ 0.85
RAPH1Q70E73 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
RAPH1Q70E73 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RAPH1Q70E73 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.38■□□□□ 0.85
RAPH1Q70E73 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RAPH1Q70E73 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAPH1Q70E73 AC010141.2-201ENST00000452426 721 ntBASIC20.38■□□□□ 0.85
RAPH1Q70E73 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAPH1Q70E73 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.38■□□□□ 0.85
RAPH1Q70E73 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAPH1Q70E73 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAPH1Q70E73 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.38■□□□□ 0.85
RAPH1Q70E73 AC092720.2-201ENST00000602388 1665 ntBASIC20.38■□□□□ 0.85
RAPH1Q70E73 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAPH1Q70E73 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAPH1Q70E73 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.38■□□□□ 0.85
RAPH1Q70E73 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAPH1Q70E73 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RAPH1Q70E73 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAPH1Q70E73 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAPH1Q70E73 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
RAPH1Q70E73 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAPH1Q70E73 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.37■□□□□ 0.85
RAPH1Q70E73 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAPH1Q70E73 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAPH1Q70E73 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAPH1Q70E73 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAPH1Q70E73 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAPH1Q70E73 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAPH1Q70E73 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAPH1Q70E73 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAPH1Q70E73 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAPH1Q70E73 DUX4L2-201ENST00000561772 1275 ntBASIC20.37■□□□□ 0.85
RAPH1Q70E73 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.37■□□□□ 0.85
RAPH1Q70E73 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.37■□□□□ 0.85
RAPH1Q70E73 AC104187.1-201ENST00000607510 612 ntBASIC20.37■□□□□ 0.85
RAPH1Q70E73 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.37■□□□□ 0.85
RAPH1Q70E73 DUX4L6-201ENST00000626483 1275 ntBASIC20.37■□□□□ 0.85
RAPH1Q70E73 DUX4L1-201ENST00000627662 1275 ntBASIC20.37■□□□□ 0.85
RAPH1Q70E73 DUX4L8-201ENST00000629013 1275 ntBASIC20.37■□□□□ 0.85
RAPH1Q70E73 DUX4L3-201ENST00000630187 1275 ntBASIC20.37■□□□□ 0.85
RAPH1Q70E73 DUX4L7-201ENST00000630678 1275 ntBASIC20.37■□□□□ 0.85
RAPH1Q70E73 DUX4L5-201ENST00000630834 1275 ntBASIC20.37■□□□□ 0.85
RAPH1Q70E73 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RAPH1Q70E73 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAPH1Q70E73 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RAPH1Q70E73 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAPH1Q70E73 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.36■□□□□ 0.85
RAPH1Q70E73 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
RAPH1Q70E73 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAPH1Q70E73 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.36■□□□□ 0.85
RAPH1Q70E73 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RAPH1Q70E73 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAPH1Q70E73 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAPH1Q70E73 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.36■□□□□ 0.85
RAPH1Q70E73 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAPH1Q70E73 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
RAPH1Q70E73 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAPH1Q70E73 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAPH1Q70E73 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RAPH1Q70E73 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.35■□□□□ 0.85
RAPH1Q70E73 AFG3L1P-217ENST00000557444 2447 ntBASIC20.35■□□□□ 0.85
RAPH1Q70E73 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAPH1Q70E73 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.35■□□□□ 0.85
RAPH1Q70E73 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAPH1Q70E73 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAPH1Q70E73 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAPH1Q70E73 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAPH1Q70E73 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RAPH1Q70E73 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.35■□□□□ 0.85
RAPH1Q70E73 SLC7A5P2-201ENST00000553010 536 ntBASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms