Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTCHD4Q6ZW05 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.68■□□□□ 0.58
PTCHD4Q6ZW05 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.68■□□□□ 0.58
PTCHD4Q6ZW05 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTCHD4Q6ZW05 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTCHD4Q6ZW05 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTCHD4Q6ZW05 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTCHD4Q6ZW05 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PTCHD4Q6ZW05 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTCHD4Q6ZW05 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTCHD4Q6ZW05 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTCHD4Q6ZW05 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.68■□□□□ 0.58
PTCHD4Q6ZW05 AL139246.5-201ENST00000606645 996 ntBASIC18.68■□□□□ 0.58
PTCHD4Q6ZW05 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
PTCHD4Q6ZW05 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PTCHD4Q6ZW05 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTCHD4Q6ZW05 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTCHD4Q6ZW05 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.68■□□□□ 0.58
PTCHD4Q6ZW05 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.68■□□□□ 0.58
PTCHD4Q6ZW05 SMG8-203ENST00000578922 2178 ntBASIC18.68■□□□□ 0.58
PTCHD4Q6ZW05 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PTCHD4Q6ZW05 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTCHD4Q6ZW05 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
PTCHD4Q6ZW05 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTCHD4Q6ZW05 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTCHD4Q6ZW05 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.67■□□□□ 0.58
PTCHD4Q6ZW05 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTCHD4Q6ZW05 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.67■□□□□ 0.58
PTCHD4Q6ZW05 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTCHD4Q6ZW05 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTCHD4Q6ZW05 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PTCHD4Q6ZW05 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PTCHD4Q6ZW05 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTCHD4Q6ZW05 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.67■□□□□ 0.58
PTCHD4Q6ZW05 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.67■□□□□ 0.58
PTCHD4Q6ZW05 TPRG1LP1-201ENST00000598702 760 ntBASIC18.67■□□□□ 0.58
PTCHD4Q6ZW05 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.67■□□□□ 0.58
PTCHD4Q6ZW05 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.67■□□□□ 0.58
PTCHD4Q6ZW05 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTCHD4Q6ZW05 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTCHD4Q6ZW05 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTCHD4Q6ZW05 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTCHD4Q6ZW05 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.67■□□□□ 0.58
PTCHD4Q6ZW05 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PTCHD4Q6ZW05 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PTCHD4Q6ZW05 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PTCHD4Q6ZW05 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTCHD4Q6ZW05 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.66■□□□□ 0.58
PTCHD4Q6ZW05 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.66■□□□□ 0.58
PTCHD4Q6ZW05 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.66■□□□□ 0.58
PTCHD4Q6ZW05 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTCHD4Q6ZW05 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTCHD4Q6ZW05 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTCHD4Q6ZW05 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTCHD4Q6ZW05 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTCHD4Q6ZW05 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.66■□□□□ 0.58
PTCHD4Q6ZW05 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.66■□□□□ 0.58
PTCHD4Q6ZW05 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.66■□□□□ 0.58
PTCHD4Q6ZW05 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
PTCHD4Q6ZW05 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTCHD4Q6ZW05 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.66■□□□□ 0.58
PTCHD4Q6ZW05 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.66■□□□□ 0.58
PTCHD4Q6ZW05 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.66■□□□□ 0.58
PTCHD4Q6ZW05 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PTCHD4Q6ZW05 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCHD4Q6ZW05 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.65■□□□□ 0.58
PTCHD4Q6ZW05 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCHD4Q6ZW05 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PTCHD4Q6ZW05 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCHD4Q6ZW05 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.65■□□□□ 0.58
PTCHD4Q6ZW05 EEF1DP3-203ENST00000566025 782 ntBASIC18.65■□□□□ 0.58
PTCHD4Q6ZW05 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCHD4Q6ZW05 AC092720.2-201ENST00000602388 1665 ntBASIC18.65■□□□□ 0.58
PTCHD4Q6ZW05 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCHD4Q6ZW05 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCHD4Q6ZW05 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTCHD4Q6ZW05 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PTCHD4Q6ZW05 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
PTCHD4Q6ZW05 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
PTCHD4Q6ZW05 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PTCHD4Q6ZW05 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PTCHD4Q6ZW05 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTCHD4Q6ZW05 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTCHD4Q6ZW05 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTCHD4Q6ZW05 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTCHD4Q6ZW05 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.64■□□□□ 0.57
PTCHD4Q6ZW05 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.64■□□□□ 0.57
PTCHD4Q6ZW05 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.64■□□□□ 0.57
PTCHD4Q6ZW05 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.64■□□□□ 0.57
PTCHD4Q6ZW05 AL354811.1-201ENST00000610286 706 ntBASIC18.64■□□□□ 0.57
PTCHD4Q6ZW05 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTCHD4Q6ZW05 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTCHD4Q6ZW05 TCF3P1-201ENST00000423021 1937 ntBASIC18.64■□□□□ 0.57
PTCHD4Q6ZW05 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTCHD4Q6ZW05 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.64■□□□□ 0.57
PTCHD4Q6ZW05 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PTCHD4Q6ZW05 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.64■□□□□ 0.57
PTCHD4Q6ZW05 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTCHD4Q6ZW05 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTCHD4Q6ZW05 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms