Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC12.89□□□□□ -0.35
LINC00575Q6W349 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00575Q6W349 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00575Q6W349 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
LINC00575Q6W349 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00575Q6W349 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00575Q6W349 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00575Q6W349 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00575Q6W349 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00575Q6W349 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
LINC00575Q6W349 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00575Q6W349 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00575Q6W349 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00575Q6W349 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00575Q6W349 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00575Q6W349 EXOC3-AS1-202ENST00000623673 1663 ntBASIC12.89□□□□□ -0.35
LINC00575Q6W349 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
LINC00575Q6W349 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00575Q6W349 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00575Q6W349 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00575Q6W349 AC120498.9-201ENST00000339021 3867 ntBASIC12.88□□□□□ -0.35
LINC00575Q6W349 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00575Q6W349 KRT8P33-201ENST00000508125 1423 ntBASIC12.88□□□□□ -0.35
LINC00575Q6W349 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00575Q6W349 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00575Q6W349 BX005040.4-201ENST00000637145 1518 ntBASIC12.88□□□□□ -0.35
LINC00575Q6W349 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LINC00575Q6W349 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00575Q6W349 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00575Q6W349 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00575Q6W349 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC00575Q6W349 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00575Q6W349 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00575Q6W349 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00575Q6W349 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00575Q6W349 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00575Q6W349 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00575Q6W349 ABHD17AP5-201ENST00000580133 923 ntBASIC12.88□□□□□ -0.35
LINC00575Q6W349 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00575Q6W349 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00575Q6W349 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00575Q6W349 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LINC00575Q6W349 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
LINC00575Q6W349 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC00575Q6W349 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC00575Q6W349 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00575Q6W349 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00575Q6W349 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00575Q6W349 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00575Q6W349 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC00575Q6W349 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00575Q6W349 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC12.88□□□□□ -0.35
LINC00575Q6W349 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00575Q6W349 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00575Q6W349 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC00575Q6W349 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00575Q6W349 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00575Q6W349 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00575Q6W349 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC00575Q6W349 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00575Q6W349 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00575Q6W349 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00575Q6W349 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
LINC00575Q6W349 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00575Q6W349 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00575Q6W349 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00575Q6W349 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
LINC00575Q6W349 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00575Q6W349 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00575Q6W349 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00575Q6W349 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00575Q6W349 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00575Q6W349 STAC-204ENST00000457375 1366 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC00575Q6W349 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LINC00575Q6W349 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC00575Q6W349 AC010997.5-201ENST00000609182 354 ntBASIC12.87□□□□□ -0.35
LINC00575Q6W349 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00575Q6W349 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LINC00575Q6W349 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC12.87□□□□□ -0.35
LINC00575Q6W349 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00575Q6W349 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00575Q6W349 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00575Q6W349 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
LINC00575Q6W349 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC00575Q6W349 POLI-202ENST00000406285 2030 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC00575Q6W349 AC090340.1-201ENST00000620778 4980 ntBASIC12.86□□□□□ -0.35
LINC00575Q6W349 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC00575Q6W349 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00575Q6W349 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC00575Q6W349 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC00575Q6W349 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00575Q6W349 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00575Q6W349 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC00575Q6W349 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00575Q6W349 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00575Q6W349 GUK1-208ENST00000366728 842 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC00575Q6W349 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
LINC00575Q6W349 MIR3181-201ENST00000578512 73 ntBASIC12.86□□□□□ -0.35
LINC00575Q6W349 AC010525.1-201ENST00000585559 441 ntBASIC12.86□□□□□ -0.35
LINC00575Q6W349 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms