Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C11orf88Q6PI97 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C11orf88Q6PI97 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C11orf88Q6PI97 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
C11orf88Q6PI97 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
C11orf88Q6PI97 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C11orf88Q6PI97 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C11orf88Q6PI97 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
C11orf88Q6PI97 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
C11orf88Q6PI97 HTR7P1-202ENST00000624664 4411 ntBASIC17.65■□□□□ 0.42
C11orf88Q6PI97 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
C11orf88Q6PI97 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
C11orf88Q6PI97 AC126544.1-201ENST00000580842 1059 ntBASIC17.65■□□□□ 0.42
C11orf88Q6PI97 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.65■□□□□ 0.42
C11orf88Q6PI97 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
C11orf88Q6PI97 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C11orf88Q6PI97 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C11orf88Q6PI97 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C11orf88Q6PI97 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C11orf88Q6PI97 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
C11orf88Q6PI97 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C11orf88Q6PI97 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.65■□□□□ 0.42
C11orf88Q6PI97 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
C11orf88Q6PI97 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C11orf88Q6PI97 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
C11orf88Q6PI97 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.65■□□□□ 0.42
C11orf88Q6PI97 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
C11orf88Q6PI97 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.64■□□□□ 0.42
C11orf88Q6PI97 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
C11orf88Q6PI97 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
C11orf88Q6PI97 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C11orf88Q6PI97 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.64■□□□□ 0.41
C11orf88Q6PI97 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
C11orf88Q6PI97 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
C11orf88Q6PI97 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
C11orf88Q6PI97 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.64■□□□□ 0.41
C11orf88Q6PI97 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
C11orf88Q6PI97 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
C11orf88Q6PI97 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.64■□□□□ 0.41
C11orf88Q6PI97 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.64■□□□□ 0.41
C11orf88Q6PI97 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
C11orf88Q6PI97 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
C11orf88Q6PI97 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
C11orf88Q6PI97 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.64■□□□□ 0.41
C11orf88Q6PI97 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C11orf88Q6PI97 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
C11orf88Q6PI97 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.64■□□□□ 0.41
C11orf88Q6PI97 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
C11orf88Q6PI97 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
C11orf88Q6PI97 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C11orf88Q6PI97 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
C11orf88Q6PI97 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
C11orf88Q6PI97 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.64■□□□□ 0.41
C11orf88Q6PI97 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C11orf88Q6PI97 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C11orf88Q6PI97 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C11orf88Q6PI97 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
C11orf88Q6PI97 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.63■□□□□ 0.41
C11orf88Q6PI97 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C11orf88Q6PI97 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
C11orf88Q6PI97 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
C11orf88Q6PI97 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
C11orf88Q6PI97 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C11orf88Q6PI97 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
C11orf88Q6PI97 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
C11orf88Q6PI97 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
C11orf88Q6PI97 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
C11orf88Q6PI97 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.63■□□□□ 0.41
C11orf88Q6PI97 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
C11orf88Q6PI97 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.63■□□□□ 0.41
C11orf88Q6PI97 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
C11orf88Q6PI97 AC006128.1-201ENST00000624704 1661 ntBASIC17.63■□□□□ 0.41
C11orf88Q6PI97 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.63■□□□□ 0.41
C11orf88Q6PI97 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C11orf88Q6PI97 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C11orf88Q6PI97 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C11orf88Q6PI97 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
C11orf88Q6PI97 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
C11orf88Q6PI97 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
C11orf88Q6PI97 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.62■□□□□ 0.41
C11orf88Q6PI97 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C11orf88Q6PI97 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.62■□□□□ 0.41
C11orf88Q6PI97 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C11orf88Q6PI97 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
C11orf88Q6PI97 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C11orf88Q6PI97 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
C11orf88Q6PI97 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C11orf88Q6PI97 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C11orf88Q6PI97 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.62■□□□□ 0.41
C11orf88Q6PI97 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.62■□□□□ 0.41
C11orf88Q6PI97 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.62■□□□□ 0.41
C11orf88Q6PI97 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
C11orf88Q6PI97 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.62■□□□□ 0.41
C11orf88Q6PI97 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.62■□□□□ 0.41
C11orf88Q6PI97 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C11orf88Q6PI97 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C11orf88Q6PI97 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.62■□□□□ 0.41
C11orf88Q6PI97 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C11orf88Q6PI97 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.62■□□□□ 0.41
C11orf88Q6PI97 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms