Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC31.16■■■□□ 2.58
CDC42BPAQ5VT25 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CDC42BPAQ5VT25 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CDC42BPAQ5VT25 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CDC42BPAQ5VT25 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC31.16■■■□□ 2.58
CDC42BPAQ5VT25 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CDC42BPAQ5VT25 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
CDC42BPAQ5VT25 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CDC42BPAQ5VT25 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC31.15■■■□□ 2.58
CDC42BPAQ5VT25 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CDC42BPAQ5VT25 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC31.15■■■□□ 2.58
CDC42BPAQ5VT25 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
CDC42BPAQ5VT25 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
CDC42BPAQ5VT25 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CDC42BPAQ5VT25 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC31.15■■■□□ 2.58
CDC42BPAQ5VT25 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CDC42BPAQ5VT25 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
CDC42BPAQ5VT25 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CDC42BPAQ5VT25 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CDC42BPAQ5VT25 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC31.14■■■□□ 2.58
CDC42BPAQ5VT25 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
CDC42BPAQ5VT25 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
CDC42BPAQ5VT25 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CDC42BPAQ5VT25 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CDC42BPAQ5VT25 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CDC42BPAQ5VT25 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CDC42BPAQ5VT25 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC31.14■■■□□ 2.58
CDC42BPAQ5VT25 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC31.14■■■□□ 2.58
CDC42BPAQ5VT25 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC31.14■■■□□ 2.58
CDC42BPAQ5VT25 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC31.14■■■□□ 2.58
CDC42BPAQ5VT25 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CDC42BPAQ5VT25 AL353708.3-201ENST00000610272 989 ntBASIC31.14■■■□□ 2.58
CDC42BPAQ5VT25 AL121829.2-201ENST00000620908 328 ntBASIC31.14■■■□□ 2.58
CDC42BPAQ5VT25 AC133561.5-201ENST00000635547 218 ntBASIC31.14■■■□□ 2.58
CDC42BPAQ5VT25 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CDC42BPAQ5VT25 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CDC42BPAQ5VT25 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC31.13■■■□□ 2.57
CDC42BPAQ5VT25 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CDC42BPAQ5VT25 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CDC42BPAQ5VT25 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC31.13■■■□□ 2.57
CDC42BPAQ5VT25 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC31.13■■■□□ 2.57
CDC42BPAQ5VT25 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC31.13■■■□□ 2.57
CDC42BPAQ5VT25 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC31.12■■■□□ 2.57
CDC42BPAQ5VT25 AP001412.1-201ENST00000608405 714 ntBASIC31.12■■■□□ 2.57
CDC42BPAQ5VT25 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
CDC42BPAQ5VT25 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC31.12■■■□□ 2.57
CDC42BPAQ5VT25 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CDC42BPAQ5VT25 PALM-207ENST00000590161 2137 ntTSL 4 BASIC31.12■■■□□ 2.57
CDC42BPAQ5VT25 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC31.12■■■□□ 2.57
CDC42BPAQ5VT25 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC31.12■■■□□ 2.57
CDC42BPAQ5VT25 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CDC42BPAQ5VT25 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC31.12■■■□□ 2.57
CDC42BPAQ5VT25 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC31.12■■■□□ 2.57
CDC42BPAQ5VT25 NUDT16P1-203ENST00000513809 620 ntBASIC31.12■■■□□ 2.57
CDC42BPAQ5VT25 RN7SL850P-201ENST00000579959 291 ntBASIC31.12■■■□□ 2.57
CDC42BPAQ5VT25 AL121906.2-201ENST00000621597 723 ntBASIC31.12■■■□□ 2.57
CDC42BPAQ5VT25 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC31.12■■■□□ 2.57
CDC42BPAQ5VT25 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CDC42BPAQ5VT25 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC31.11■■■□□ 2.57
CDC42BPAQ5VT25 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC31.11■■■□□ 2.57
CDC42BPAQ5VT25 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CDC42BPAQ5VT25 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC31.11■■■□□ 2.57
CDC42BPAQ5VT25 ECEL1P1-201ENST00000373592 1742 ntBASIC31.11■■■□□ 2.57
CDC42BPAQ5VT25 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CDC42BPAQ5VT25 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CDC42BPAQ5VT25 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC31.11■■■□□ 2.57
CDC42BPAQ5VT25 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC31.11■■■□□ 2.57
CDC42BPAQ5VT25 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC31.11■■■□□ 2.57
CDC42BPAQ5VT25 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CDC42BPAQ5VT25 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CDC42BPAQ5VT25 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC31.1■■■□□ 2.57
CDC42BPAQ5VT25 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CDC42BPAQ5VT25 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
CDC42BPAQ5VT25 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CDC42BPAQ5VT25 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CDC42BPAQ5VT25 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CDC42BPAQ5VT25 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC31.1■■■□□ 2.57
CDC42BPAQ5VT25 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
CDC42BPAQ5VT25 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CDC42BPAQ5VT25 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CDC42BPAQ5VT25 PARN-205ENST00000539279 1557 ntTSL 2 BASIC31.1■■■□□ 2.57
CDC42BPAQ5VT25 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC31.1■■■□□ 2.57
CDC42BPAQ5VT25 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC31.1■■■□□ 2.57
CDC42BPAQ5VT25 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC31.1■■■□□ 2.57
CDC42BPAQ5VT25 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CDC42BPAQ5VT25 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC31.1■■■□□ 2.57
CDC42BPAQ5VT25 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CDC42BPAQ5VT25 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CDC42BPAQ5VT25 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CDC42BPAQ5VT25 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CDC42BPAQ5VT25 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CDC42BPAQ5VT25 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC31.09■■■□□ 2.57
CDC42BPAQ5VT25 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC31.09■■■□□ 2.57
CDC42BPAQ5VT25 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
CDC42BPAQ5VT25 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC31.09■■■□□ 2.57
CDC42BPAQ5VT25 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC31.08■■■□□ 2.57
CDC42BPAQ5VT25 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC31.08■■■□□ 2.57
CDC42BPAQ5VT25 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CDC42BPAQ5VT25 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CDC42BPAQ5VT25 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms