Protein–RNA interactions for Protein: Q5T2R2

PDSS1, Decaprenyl-diphosphate synthase subunit 1, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDSS1Q5T2R2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDSS1Q5T2R2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDSS1Q5T2R2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDSS1Q5T2R2 TSPY6P-201ENST00000448518 926 ntBASIC18.45■□□□□ 0.54
PDSS1Q5T2R2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PDSS1Q5T2R2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PDSS1Q5T2R2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.45■□□□□ 0.54
PDSS1Q5T2R2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDSS1Q5T2R2 AC010980.2-201ENST00000587099 1412 ntBASIC18.45■□□□□ 0.54
PDSS1Q5T2R2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDSS1Q5T2R2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDSS1Q5T2R2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.45■□□□□ 0.54
PDSS1Q5T2R2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDSS1Q5T2R2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDSS1Q5T2R2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDSS1Q5T2R2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDSS1Q5T2R2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDSS1Q5T2R2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.44■□□□□ 0.54
PDSS1Q5T2R2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDSS1Q5T2R2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PDSS1Q5T2R2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDSS1Q5T2R2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PDSS1Q5T2R2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDSS1Q5T2R2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PDSS1Q5T2R2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDSS1Q5T2R2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDSS1Q5T2R2 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDSS1Q5T2R2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDSS1Q5T2R2 AC093787.1-201ENST00000450396 207 ntBASIC18.44■□□□□ 0.54
PDSS1Q5T2R2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.44■□□□□ 0.54
PDSS1Q5T2R2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDSS1Q5T2R2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.44■□□□□ 0.54
PDSS1Q5T2R2 AC104771.1-201ENST00000603335 964 ntBASIC18.44■□□□□ 0.54
PDSS1Q5T2R2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDSS1Q5T2R2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PDSS1Q5T2R2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDSS1Q5T2R2 AF106564.1-201ENST00000607058 2553 ntBASIC18.44■□□□□ 0.54
PDSS1Q5T2R2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PDSS1Q5T2R2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
PDSS1Q5T2R2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.44■□□□□ 0.54
PDSS1Q5T2R2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDSS1Q5T2R2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDSS1Q5T2R2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PDSS1Q5T2R2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
PDSS1Q5T2R2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.43■□□□□ 0.54
PDSS1Q5T2R2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.43■□□□□ 0.54
PDSS1Q5T2R2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDSS1Q5T2R2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDSS1Q5T2R2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDSS1Q5T2R2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDSS1Q5T2R2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDSS1Q5T2R2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.43■□□□□ 0.54
PDSS1Q5T2R2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.43■□□□□ 0.54
PDSS1Q5T2R2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDSS1Q5T2R2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDSS1Q5T2R2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PDSS1Q5T2R2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.43■□□□□ 0.54
PDSS1Q5T2R2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.42■□□□□ 0.54
PDSS1Q5T2R2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDSS1Q5T2R2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.42■□□□□ 0.54
PDSS1Q5T2R2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDSS1Q5T2R2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDSS1Q5T2R2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.42■□□□□ 0.54
PDSS1Q5T2R2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDSS1Q5T2R2 LSM12P1-201ENST00000411836 588 ntBASIC18.42■□□□□ 0.54
PDSS1Q5T2R2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
PDSS1Q5T2R2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.42■□□□□ 0.54
PDSS1Q5T2R2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.42■□□□□ 0.54
PDSS1Q5T2R2 MIR4758-201ENST00000577688 71 ntBASIC18.42■□□□□ 0.54
PDSS1Q5T2R2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.42■□□□□ 0.54
PDSS1Q5T2R2 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
PDSS1Q5T2R2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PDSS1Q5T2R2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDSS1Q5T2R2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.42■□□□□ 0.54
PDSS1Q5T2R2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDSS1Q5T2R2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.42■□□□□ 0.54
PDSS1Q5T2R2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.42■□□□□ 0.54
PDSS1Q5T2R2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDSS1Q5T2R2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PDSS1Q5T2R2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PDSS1Q5T2R2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDSS1Q5T2R2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.41■□□□□ 0.54
PDSS1Q5T2R2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.41■□□□□ 0.54
PDSS1Q5T2R2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.41■□□□□ 0.54
PDSS1Q5T2R2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PDSS1Q5T2R2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDSS1Q5T2R2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.41■□□□□ 0.54
PDSS1Q5T2R2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDSS1Q5T2R2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDSS1Q5T2R2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDSS1Q5T2R2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDSS1Q5T2R2 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.41■□□□□ 0.54
PDSS1Q5T2R2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.41■□□□□ 0.54
PDSS1Q5T2R2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.41■□□□□ 0.54
PDSS1Q5T2R2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.41■□□□□ 0.54
PDSS1Q5T2R2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.41■□□□□ 0.54
PDSS1Q5T2R2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDSS1Q5T2R2 CYP2T3P-201ENST00000601990 817 ntBASIC18.41■□□□□ 0.54
PDSS1Q5T2R2 AL589743.5-201ENST00000616611 1050 ntBASIC18.41■□□□□ 0.54
PDSS1Q5T2R2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms