Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.22■□□□□ 0.67
RUNDC3AQ59EK9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RUNDC3AQ59EK9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RUNDC3AQ59EK9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RUNDC3AQ59EK9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RUNDC3AQ59EK9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.22■□□□□ 0.67
RUNDC3AQ59EK9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.22■□□□□ 0.67
RUNDC3AQ59EK9 AC010141.2-201ENST00000452426 721 ntBASIC19.22■□□□□ 0.67
RUNDC3AQ59EK9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RUNDC3AQ59EK9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.22■□□□□ 0.67
RUNDC3AQ59EK9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.22■□□□□ 0.67
RUNDC3AQ59EK9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.22■□□□□ 0.67
RUNDC3AQ59EK9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RUNDC3AQ59EK9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RUNDC3AQ59EK9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.22■□□□□ 0.67
RUNDC3AQ59EK9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.22■□□□□ 0.67
RUNDC3AQ59EK9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RUNDC3AQ59EK9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RUNDC3AQ59EK9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.21■□□□□ 0.67
RUNDC3AQ59EK9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
RUNDC3AQ59EK9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RUNDC3AQ59EK9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RUNDC3AQ59EK9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.21■□□□□ 0.67
RUNDC3AQ59EK9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RUNDC3AQ59EK9 AC125437.2-201ENST00000625180 2167 ntBASIC19.21■□□□□ 0.67
RUNDC3AQ59EK9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RUNDC3AQ59EK9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RUNDC3AQ59EK9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RUNDC3AQ59EK9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RUNDC3AQ59EK9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.21■□□□□ 0.67
RUNDC3AQ59EK9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RUNDC3AQ59EK9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.2■□□□□ 0.66
RUNDC3AQ59EK9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RUNDC3AQ59EK9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RUNDC3AQ59EK9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RUNDC3AQ59EK9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RUNDC3AQ59EK9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RUNDC3AQ59EK9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RUNDC3AQ59EK9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.2■□□□□ 0.66
RUNDC3AQ59EK9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RUNDC3AQ59EK9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RUNDC3AQ59EK9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.2■□□□□ 0.66
RUNDC3AQ59EK9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RUNDC3AQ59EK9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RUNDC3AQ59EK9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.2■□□□□ 0.66
RUNDC3AQ59EK9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
RUNDC3AQ59EK9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RUNDC3AQ59EK9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RUNDC3AQ59EK9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.19■□□□□ 0.66
RUNDC3AQ59EK9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RUNDC3AQ59EK9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
RUNDC3AQ59EK9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RUNDC3AQ59EK9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RUNDC3AQ59EK9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.19■□□□□ 0.66
RUNDC3AQ59EK9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RUNDC3AQ59EK9 IRS3P-201ENST00000223076 1006 ntBASIC19.19■□□□□ 0.66
RUNDC3AQ59EK9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.19■□□□□ 0.66
RUNDC3AQ59EK9 SLC7A5P2-201ENST00000553010 536 ntBASIC19.19■□□□□ 0.66
RUNDC3AQ59EK9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.19■□□□□ 0.66
RUNDC3AQ59EK9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.19■□□□□ 0.66
RUNDC3AQ59EK9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RUNDC3AQ59EK9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RUNDC3AQ59EK9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.19■□□□□ 0.66
RUNDC3AQ59EK9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RUNDC3AQ59EK9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RUNDC3AQ59EK9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RUNDC3AQ59EK9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RUNDC3AQ59EK9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RUNDC3AQ59EK9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RUNDC3AQ59EK9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RUNDC3AQ59EK9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RUNDC3AQ59EK9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RUNDC3AQ59EK9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RUNDC3AQ59EK9 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.18■□□□□ 0.66
RUNDC3AQ59EK9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.18■□□□□ 0.66
RUNDC3AQ59EK9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.18■□□□□ 0.66
RUNDC3AQ59EK9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.18■□□□□ 0.66
RUNDC3AQ59EK9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.18■□□□□ 0.66
RUNDC3AQ59EK9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.18■□□□□ 0.66
RUNDC3AQ59EK9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.18■□□□□ 0.66
RUNDC3AQ59EK9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RUNDC3AQ59EK9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.18■□□□□ 0.66
RUNDC3AQ59EK9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RUNDC3AQ59EK9 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.18■□□□□ 0.66
RUNDC3AQ59EK9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RUNDC3AQ59EK9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RUNDC3AQ59EK9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.18■□□□□ 0.66
RUNDC3AQ59EK9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RUNDC3AQ59EK9 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RUNDC3AQ59EK9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RUNDC3AQ59EK9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RUNDC3AQ59EK9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
RUNDC3AQ59EK9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.17■□□□□ 0.66
RUNDC3AQ59EK9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RUNDC3AQ59EK9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RUNDC3AQ59EK9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RUNDC3AQ59EK9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RUNDC3AQ59EK9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RUNDC3AQ59EK9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RUNDC3AQ59EK9 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms