Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.68■□□□□ 0.42
RSPO1Q2MKA7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO1Q2MKA7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RSPO1Q2MKA7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
RSPO1Q2MKA7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
RSPO1Q2MKA7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO1Q2MKA7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.68■□□□□ 0.42
RSPO1Q2MKA7 AC112907.3-201ENST00000577781 2400 ntBASIC17.68■□□□□ 0.42
RSPO1Q2MKA7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO1Q2MKA7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO1Q2MKA7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO1Q2MKA7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO1Q2MKA7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO1Q2MKA7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO1Q2MKA7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.68■□□□□ 0.42
RSPO1Q2MKA7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.68■□□□□ 0.42
RSPO1Q2MKA7 AC087633.2-202ENST00000565166 1439 ntBASIC17.68■□□□□ 0.42
RSPO1Q2MKA7 SMG8-203ENST00000578922 2178 ntBASIC17.68■□□□□ 0.42
RSPO1Q2MKA7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RSPO1Q2MKA7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.68■□□□□ 0.42
RSPO1Q2MKA7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO1Q2MKA7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO1Q2MKA7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO1Q2MKA7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RSPO1Q2MKA7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RSPO1Q2MKA7 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.67■□□□□ 0.42
RSPO1Q2MKA7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.67■□□□□ 0.42
RSPO1Q2MKA7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.67■□□□□ 0.42
RSPO1Q2MKA7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.67■□□□□ 0.42
RSPO1Q2MKA7 AC231657.2-201ENST00000624556 255 ntBASIC17.67■□□□□ 0.42
RSPO1Q2MKA7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.67■□□□□ 0.42
RSPO1Q2MKA7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RSPO1Q2MKA7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.67■□□□□ 0.42
RSPO1Q2MKA7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RSPO1Q2MKA7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RSPO1Q2MKA7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RSPO1Q2MKA7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.67■□□□□ 0.42
RSPO1Q2MKA7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RSPO1Q2MKA7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.67■□□□□ 0.42
RSPO1Q2MKA7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RSPO1Q2MKA7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RSPO1Q2MKA7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RSPO1Q2MKA7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.66■□□□□ 0.42
RSPO1Q2MKA7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RSPO1Q2MKA7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.66■□□□□ 0.42
RSPO1Q2MKA7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RSPO1Q2MKA7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RSPO1Q2MKA7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RSPO1Q2MKA7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RSPO1Q2MKA7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RSPO1Q2MKA7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RSPO1Q2MKA7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RSPO1Q2MKA7 AC007322.1-201ENST00000426983 750 ntBASIC17.66■□□□□ 0.42
RSPO1Q2MKA7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.66■□□□□ 0.42
RSPO1Q2MKA7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.66■□□□□ 0.42
RSPO1Q2MKA7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RSPO1Q2MKA7 AL356652.1-201ENST00000615962 565 ntBASIC17.66■□□□□ 0.42
RSPO1Q2MKA7 AC100791.3-201ENST00000617619 330 ntBASIC17.66■□□□□ 0.42
RSPO1Q2MKA7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RSPO1Q2MKA7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RSPO1Q2MKA7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RSPO1Q2MKA7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.66■□□□□ 0.42
RSPO1Q2MKA7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.66■□□□□ 0.42
RSPO1Q2MKA7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.66■□□□□ 0.42
RSPO1Q2MKA7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RSPO1Q2MKA7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
RSPO1Q2MKA7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.64■□□□□ 0.42
RSPO1Q2MKA7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.64■□□□□ 0.42
RSPO1Q2MKA7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.64■□□□□ 0.42
RSPO1Q2MKA7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RSPO1Q2MKA7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RSPO1Q2MKA7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms