Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 AL162412.1-201ENST00000567129 965 ntBASIC20.59■□□□□ 0.89
CDH17Q12864 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDH17Q12864 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH17Q12864 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH17Q12864 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH17Q12864 KRT8P36-201ENST00000489121 1440 ntBASIC20.59■□□□□ 0.89
CDH17Q12864 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH17Q12864 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH17Q12864 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.59■□□□□ 0.89
CDH17Q12864 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH17Q12864 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH17Q12864 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
CDH17Q12864 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDH17Q12864 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.58■□□□□ 0.89
CDH17Q12864 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.58■□□□□ 0.89
CDH17Q12864 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CDH17Q12864 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
CDH17Q12864 MFSD11-216ENST00000590393 1141 ntBASIC20.58■□□□□ 0.89
CDH17Q12864 MIR5787-201ENST00000611784 55 ntBASIC20.58■□□□□ 0.89
CDH17Q12864 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDH17Q12864 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDH17Q12864 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDH17Q12864 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDH17Q12864 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CDH17Q12864 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDH17Q12864 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH17Q12864 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.57■□□□□ 0.88
CDH17Q12864 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH17Q12864 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.57■□□□□ 0.88
CDH17Q12864 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH17Q12864 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH17Q12864 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH17Q12864 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.57■□□□□ 0.88
CDH17Q12864 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDH17Q12864 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDH17Q12864 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.57■□□□□ 0.88
CDH17Q12864 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.57■□□□□ 0.88
CDH17Q12864 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.57■□□□□ 0.88
CDH17Q12864 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH17Q12864 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.57■□□□□ 0.88
CDH17Q12864 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH17Q12864 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH17Q12864 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH17Q12864 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH17Q12864 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
CDH17Q12864 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.56■□□□□ 0.88
CDH17Q12864 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH17Q12864 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDH17Q12864 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.56■□□□□ 0.88
CDH17Q12864 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.56■□□□□ 0.88
CDH17Q12864 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.56■□□□□ 0.88
CDH17Q12864 AC006015.1-201ENST00000429970 570 ntBASIC20.56■□□□□ 0.88
CDH17Q12864 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDH17Q12864 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.56■□□□□ 0.88
CDH17Q12864 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.56■□□□□ 0.88
CDH17Q12864 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH17Q12864 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH17Q12864 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDH17Q12864 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.56■□□□□ 0.88
CDH17Q12864 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDH17Q12864 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH17Q12864 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH17Q12864 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH17Q12864 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH17Q12864 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH17Q12864 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDH17Q12864 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CDH17Q12864 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH17Q12864 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.55■□□□□ 0.88
CDH17Q12864 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CDH17Q12864 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
CDH17Q12864 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.55■□□□□ 0.88
CDH17Q12864 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH17Q12864 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH17Q12864 PGM5P4-201ENST00000421970 445 ntBASIC20.55■□□□□ 0.88
CDH17Q12864 AL162430.1-201ENST00000480705 870 ntBASIC20.55■□□□□ 0.88
CDH17Q12864 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.55■□□□□ 0.88
CDH17Q12864 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.55■□□□□ 0.88
CDH17Q12864 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.55■□□□□ 0.88
CDH17Q12864 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH17Q12864 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.55■□□□□ 0.88
CDH17Q12864 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH17Q12864 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH17Q12864 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH17Q12864 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH17Q12864 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDH17Q12864 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH17Q12864 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.54■□□□□ 0.88
CDH17Q12864 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CDH17Q12864 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.54■□□□□ 0.88
CDH17Q12864 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.54■□□□□ 0.88
CDH17Q12864 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CDH17Q12864 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CDH17Q12864 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDH17Q12864 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDH17Q12864 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH17Q12864 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDH17Q12864 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH17Q12864 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH17Q12864 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms