Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 YBR223W-AYBR223W-A 120 nt-0.18□□□□□ -2.44
VPS13Q07878 HMI1YOL095C 2121 nt-0.18□□□□□ -2.44
VPS13Q07878 YOR062CYOR062C 807 nt-0.19□□□□□ -2.44
VPS13Q07878 YGL109WYGL109W 324 nt-0.19□□□□□ -2.44
VPS13Q07878 VPS55YJR044C 423 nt-0.19□□□□□ -2.44
VPS13Q07878 YKL100CYKL100C 1764 nt-0.2□□□□□ -2.44
VPS13Q07878 HDA3YPR179C 1968 nt-0.2□□□□□ -2.44
VPS13Q07878 YFR054CYFR054C 579 nt-0.2□□□□□ -2.44
VPS13Q07878 SDL1YIL167W 633 nt-0.2□□□□□ -2.44
VPS13Q07878 SPC1YJR010C-A 285 nt-0.2□□□□□ -2.44
VPS13Q07878 USV1YPL230W 1176 nt-0.2□□□□□ -2.44
VPS13Q07878 YDL026WYDL026W 312 nt-0.2□□□□□ -2.44
VPS13Q07878 RGM1YMR182C 636 nt-0.2□□□□□ -2.44
VPS13Q07878 YDL187CYDL187C 330 nt-0.21□□□□□ -2.44
VPS13Q07878 RAM2YKL019W 951 nt-0.21□□□□□ -2.44
VPS13Q07878 YNL109WYNL109W 546 nt-0.21□□□□□ -2.44
VPS13Q07878 NOP12YOL041C 1380 nt-0.21□□□□□ -2.44
VPS13Q07878 ASE1YOR058C 2658 nt-0.21□□□□□ -2.44
VPS13Q07878 LSO2YGR169C-A 279 nt-0.21□□□□□ -2.44
VPS13Q07878 tT(UGU)G1tT(UGU)G1 72 nt-0.21□□□□□ -2.44
VPS13Q07878 tT(UGU)G2tT(UGU)G2 72 nt-0.21□□□□□ -2.44
VPS13Q07878 tT(UGU)PtT(UGU)P 72 nt-0.21□□□□□ -2.44
VPS13Q07878 MED8YBR193C 672 nt-0.21□□□□□ -2.44
VPS13Q07878 CLB5YPR120C 1308 nt-0.22□□□□□ -2.44
VPS13Q07878 CTL1YMR180C 963 nt-0.22□□□□□ -2.44
VPS13Q07878 ASM4YDL088C 1587 nt-0.22□□□□□ -2.44
VPS13Q07878 JJJ3YJR097W 519 nt-0.22□□□□□ -2.45
VPS13Q07878 snR36snR36 182 nt-0.22□□□□□ -2.45
VPS13Q07878 NUR1YDL089W 1455 nt-0.23□□□□□ -2.45
VPS13Q07878 RPL37BYDR500C 267 nt-0.23□□□□□ -2.45
VPS13Q07878 YER147C-AYER147C-A 411 nt-0.23□□□□□ -2.45
VPS13Q07878 EFG1YGR271C-A 702 nt-0.23□□□□□ -2.45
VPS13Q07878 MIC19YFR011C 513 nt-0.24□□□□□ -2.45
VPS13Q07878 VMA22YHR060W 546 nt-0.24□□□□□ -2.45
VPS13Q07878 ROX1YPR065W 1107 nt-0.24□□□□□ -2.45
VPS13Q07878 PRP5YBR237W 2550 nt-0.24□□□□□ -2.45
VPS13Q07878 YIR020CYIR020C 303 nt-0.24□□□□□ -2.45
VPS13Q07878 YIR030W-AYIR030W-A 384 nt-0.24□□□□□ -2.45
VPS13Q07878 YNL010WYNL010W 726 nt-0.24□□□□□ -2.45
VPS13Q07878 YOL013W-AYOL013W-A 192 nt-0.24□□□□□ -2.45
VPS13Q07878 NOP19YGR251W 591 nt-0.25□□□□□ -2.45
VPS13Q07878 ECM12YHR021W-A 456 nt-0.25□□□□□ -2.45
VPS13Q07878 YKR075W-AYKR075W-A 270 nt-0.25□□□□□ -2.45
VPS13Q07878 YMR178WYMR178W 825 nt-0.25□□□□□ -2.45
VPS13Q07878 PEX27YOR193W 1131 nt-0.25□□□□□ -2.45
VPS13Q07878 SCW11YGL028C 1629 nt-0.25□□□□□ -2.45
VPS13Q07878 RED1YLR263W 2484 nt-0.25□□□□□ -2.45
VPS13Q07878 WAR1YML076C 2835 nt-0.25□□□□□ -2.45
VPS13Q07878 YHR212CYHR212C 336 nt-0.25□□□□□ -2.45
VPS13Q07878 YUH1YJR099W 711 nt-0.25□□□□□ -2.45
VPS13Q07878 YAR060CYAR060C 336 nt-0.25□□□□□ -2.45
VPS13Q07878 YOR169CYOR169C 465 nt-0.25□□□□□ -2.45
VPS13Q07878 YRO2YBR054W 1035 nt-0.25□□□□□ -2.45
VPS13Q07878 MUD2YKL074C 1584 nt-0.25□□□□□ -2.45
VPS13Q07878 COX12YLR038C 252 nt-0.26□□□□□ -2.45
VPS13Q07878 RPL26AYLR344W 384 nt-0.26□□□□□ -2.45
VPS13Q07878 GRX2YDR513W 432 nt-0.26□□□□□ -2.45
VPS13Q07878 TRS20YBR254C 528 nt-0.26□□□□□ -2.45
VPS13Q07878 YKL136WYKL136W 399 nt-0.27□□□□□ -2.45
VPS13Q07878 PTP2YOR208W 2253 nt-0.27□□□□□ -2.45
VPS13Q07878 YGR015CYGR015C 987 nt-0.27□□□□□ -2.45
VPS13Q07878 PDS5YMR076C 3834 nt-0.27□□□□□ -2.45
VPS13Q07878 SEC10YLR166C 2616 nt-0.27□□□□□ -2.45
VPS13Q07878 YPL197CYPL197C 414 nt-0.27□□□□□ -2.45
VPS13Q07878 ALY2YJL084C 3141 nt-0.28□□□□□ -2.45
VPS13Q07878 SGO1YOR073W 1773 nt-0.29□□□□□ -2.46
VPS13Q07878 PUS9YDL036C 1389 nt-0.29□□□□□ -2.46
VPS13Q07878 YER067C-AYER067C-A 324 nt-0.29□□□□□ -2.46
VPS13Q07878 YHL002C-AYHL002C-A 489 nt-0.29□□□□□ -2.46
VPS13Q07878 YOR108C-AYOR108C-A 210 nt-0.29□□□□□ -2.46
VPS13Q07878 YOR192C-AYOR192C-A 1317 nt-0.29□□□□□ -2.46
VPS13Q07878 YDR262WYDR262W 819 nt-0.3□□□□□ -2.46
VPS13Q07878 DIG2YDR480W 972 nt-0.3□□□□□ -2.46
VPS13Q07878 YLR101CYLR101C 396 nt-0.3□□□□□ -2.46
VPS13Q07878 MAM1YER106W 909 nt-0.3□□□□□ -2.46
VPS13Q07878 CSM2YIL132C 642 nt-0.3□□□□□ -2.46
VPS13Q07878 BUR2YLR226W 1188 nt-0.3□□□□□ -2.46
VPS13Q07878 RRP15YPR143W 753 nt-0.3□□□□□ -2.46
VPS13Q07878 VTI1YMR197C 654 nt-0.31□□□□□ -2.46
VPS13Q07878 YNL050CYNL050C 813 nt-0.31□□□□□ -2.46
VPS13Q07878 MTC7YEL033W 420 nt-0.31□□□□□ -2.46
VPS13Q07878 RAD6YGL058W 519 nt-0.31□□□□□ -2.46
VPS13Q07878 RPL26BYGR034W 384 nt-0.31□□□□□ -2.46
VPS13Q07878 YHR214W-AYHR214W-A 486 nt-0.31□□□□□ -2.46
VPS13Q07878 YAR068WYAR068W 486 nt-0.31□□□□□ -2.46
VPS13Q07878 CDA2YLR308W 939 nt-0.31□□□□□ -2.46
VPS13Q07878 SWS2YNL081C 432 nt-0.31□□□□□ -2.46
VPS13Q07878 IME1YJR094C 1083 nt-0.31□□□□□ -2.46
VPS13Q07878 YCR022CYCR022C 345 nt-0.32□□□□□ -2.46
VPS13Q07878 VMA21YGR105W 234 nt-0.32□□□□□ -2.46
VPS13Q07878 NNF2YGR089W 2811 nt-0.32□□□□□ -2.46
VPS13Q07878 MSS2YDL107W 1056 nt-0.32□□□□□ -2.46
VPS13Q07878 NOP53YPL146C 1368 nt-0.33□□□□□ -2.46
VPS13Q07878 YJR141WYJR141W 1044 nt-0.33□□□□□ -2.46
VPS13Q07878 YLR416CYLR416C 399 nt-0.33□□□□□ -2.46
VPS13Q07878 YLR053CYLR053C 327 nt-0.33□□□□□ -2.46
VPS13Q07878 ERD2YBL040C 660 nt-0.33□□□□□ -2.46
VPS13Q07878 YOR020W-AYOR020W-A 273 nt-0.33□□□□□ -2.46
VPS13Q07878 GRX7YBR014C 612 nt-0.34□□□□□ -2.46
VPS13Q07878 AIM44YPL158C 2277 nt-0.34□□□□□ -2.46
Retrieved 100 of 7,029 protein–RNA pairs in 53.3 ms