Protein–RNA interactions for Protein: Q06629

HDA2, HDA1 complex subunit 2, yeastyeast

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA2Q06629 RPL36BYPL249C-A 303 nt3.36□□□□□ -1.87
HDA2Q06629 YPR022CYPR022C 3402 nt3.36□□□□□ -1.87
HDA2Q06629 SMC2YFR031C 3513 nt3.35□□□□□ -1.87
HDA2Q06629 APE2YKL157W 2859 nt3.35□□□□□ -1.87
HDA2Q06629 TRM2YKR056W 1920 nt3.35□□□□□ -1.87
HDA2Q06629 PSO2YMR137C 1986 nt3.35□□□□□ -1.87
HDA2Q06629 HTB2YBL002W 396 nt3.35□□□□□ -1.87
HDA2Q06629 SHH3YMR118C 591 nt3.35□□□□□ -1.87
HDA2Q06629 BAS1YKR099W 2436 nt3.35□□□□□ -1.87
HDA2Q06629 RDS1YCR106W 2499 nt3.35□□□□□ -1.87
HDA2Q06629 YOL057WYOL057W 2136 nt3.35□□□□□ -1.87
HDA2Q06629 RIM20YOR275C 1986 nt3.34□□□□□ -1.87
HDA2Q06629 TIM11YDR322C-A 291 nt3.34□□□□□ -1.87
HDA2Q06629 VPS53YJL029C 2469 nt3.34□□□□□ -1.88
HDA2Q06629 RSF2YJR127C 4143 nt3.34□□□□□ -1.88
HDA2Q06629 TRS120YDR407C 3870 nt3.34□□□□□ -1.88
HDA2Q06629 LRE1YCL051W 1752 nt3.33□□□□□ -1.88
HDA2Q06629 SLA1YBL007C 3735 nt3.33□□□□□ -1.88
HDA2Q06629 YHL042WYHL042W 453 nt3.33□□□□□ -1.88
HDA2Q06629 YIL071W-AYIL071W-A 477 nt3.33□□□□□ -1.88
HDA2Q06629 YLR053CYLR053C 327 nt3.33□□□□□ -1.88
HDA2Q06629 YNL010WYNL010W 726 nt3.33□□□□□ -1.88
HDA2Q06629 CUL3YGR003W 2235 nt3.32□□□□□ -1.88
HDA2Q06629 PEX1YKL197C 3132 nt3.32□□□□□ -1.88
HDA2Q06629 TFB5YDR079C-A 219 nt3.32□□□□□ -1.88
HDA2Q06629 YDR544CYDR544C 429 nt3.32□□□□□ -1.88
HDA2Q06629 YGL074CYGL074C 327 nt3.32□□□□□ -1.88
HDA2Q06629 SMD1YGR074W 441 nt3.32□□□□□ -1.88
HDA2Q06629 VPS55YJR044C 423 nt3.32□□□□□ -1.88
HDA2Q06629 COX19YLL018C-A 297 nt3.32□□□□□ -1.88
HDA2Q06629 RPL32YBL092W 393 nt3.32□□□□□ -1.88
HDA2Q06629 PHO2YDL106C 1680 nt3.32□□□□□ -1.88
HDA2Q06629 PUF6YDR496C 1971 nt3.32□□□□□ -1.88
HDA2Q06629 ITC1YGL133W 3795 nt3.32□□□□□ -1.88
HDA2Q06629 YDR193WYDR193W 399 nt3.31□□□□□ -1.88
HDA2Q06629 tF(GAA)QtF(GAA)Q 75 nt3.31□□□□□ -1.88
HDA2Q06629 YMR326CYMR326C 309 nt3.31□□□□□ -1.88
HDA2Q06629 KAP95YLR347C 2586 nt3.31□□□□□ -1.88
HDA2Q06629 SSM4YIL030C 3960 nt3.3□□□□□ -1.88
HDA2Q06629 GCD6YDR211W 2139 nt3.3□□□□□ -1.88
HDA2Q06629 INA22YIR024C 651 nt3.3□□□□□ -1.88
HDA2Q06629 YMR324CYMR324C 243 nt3.3□□□□□ -1.88
HDA2Q06629 YLL007CYLL007C 1998 nt3.3□□□□□ -1.88
HDA2Q06629 YAK1YJL141C 2424 nt3.3□□□□□ -1.88
HDA2Q06629 DAN4YJR151C 3486 nt3.29□□□□□ -1.88
HDA2Q06629 YAT2YER024W 2772 nt3.29□□□□□ -1.88
HDA2Q06629 PUF4YGL014W 2667 nt3.29□□□□□ -1.88
HDA2Q06629 NPR3YHL023C 3441 nt3.29□□□□□ -1.88
HDA2Q06629 YGL217CYGL217C 342 nt3.29□□□□□ -1.88
HDA2Q06629 CYB5YNL111C 363 nt3.29□□□□□ -1.88
HDA2Q06629 CDC20YGL116W 1833 nt3.28□□□□□ -1.88
HDA2Q06629 GIN4YDR507C 3429 nt3.28□□□□□ -1.88
HDA2Q06629 snR60snR60 104 nt3.28□□□□□ -1.88
HDA2Q06629 YDL242WYDL242W 354 nt3.28□□□□□ -1.88
HDA2Q06629 YFL065CYFL065C 309 nt3.28□□□□□ -1.88
HDA2Q06629 ANB1YJR047C 474 nt3.28□□□□□ -1.88
HDA2Q06629 RPS27AYKL156W 249 nt3.28□□□□□ -1.88
HDA2Q06629 RPL25YOL127W 429 nt3.28□□□□□ -1.88
HDA2Q06629 NUT2YPR168W 474 nt3.28□□□□□ -1.88
HDA2Q06629 snR52snR52 92 nt3.28□□□□□ -1.88
HDA2Q06629 DUF1YOL087C 3351 nt3.28□□□□□ -1.88
HDA2Q06629 ENA5YDR038C 3276 nt3.28□□□□□ -1.88
HDA2Q06629 ENA2YDR039C 3276 nt3.28□□□□□ -1.88
HDA2Q06629 ENA1YDR040C 3276 nt3.28□□□□□ -1.88
HDA2Q06629 MDN1YLR106C 14733 nt3.27□□□□□ -1.89
HDA2Q06629 ASG1YIL130W 2895 nt3.27□□□□□ -1.89
HDA2Q06629 KAR3YPR141C 2190 nt3.27□□□□□ -1.89
HDA2Q06629 YBR121C-AYBR121C-A 159 nt3.27□□□□□ -1.89
HDA2Q06629 YBR224WYBR224W 516 nt3.27□□□□□ -1.89
HDA2Q06629 MET5YJR137C 4329 nt3.27□□□□□ -1.89
HDA2Q06629 YTA7YGR270W 4140 nt3.27□□□□□ -1.89
HDA2Q06629 LRG1YDL240W 3054 nt3.26□□□□□ -1.89
HDA2Q06629 STT4YLR305C 5703 nt3.26□□□□□ -1.89
HDA2Q06629 DIS3YOL021C 3006 nt3.25□□□□□ -1.89
HDA2Q06629 OSH3YHR073W 2991 nt3.25□□□□□ -1.89
HDA2Q06629 SPT10YJL127C 1923 nt3.25□□□□□ -1.89
HDA2Q06629 YGL024WYGL024W 336 nt3.25□□□□□ -1.89
HDA2Q06629 LSO2YGR169C-A 279 nt3.25□□□□□ -1.89
HDA2Q06629 TMA19YKL056C 504 nt3.25□□□□□ -1.89
HDA2Q06629 YMR321CYMR321C 318 nt3.25□□□□□ -1.89
HDA2Q06629 PSY2YNL201C 2577 nt3.25□□□□□ -1.89
HDA2Q06629 AI5_ALPHAQ0070 1893 nt3.24□□□□□ -1.89
HDA2Q06629 RPA135YPR010C 3612 nt3.24□□□□□ -1.89
HDA2Q06629 ALA1YOR335C 2877 nt3.24□□□□□ -1.89
HDA2Q06629 QCR7YDR529C 384 nt3.24□□□□□ -1.89
HDA2Q06629 TAF2YCR042C 4224 nt3.24□□□□□ -1.89
HDA2Q06629 ARO1YDR127W 4767 nt3.23□□□□□ -1.89
HDA2Q06629 TSC11YER093C 4293 nt3.23□□□□□ -1.89
HDA2Q06629 RRP5YMR229C 5190 nt3.23□□□□□ -1.89
HDA2Q06629 RBK1YCR036W 1002 nt3.23□□□□□ -1.89
HDA2Q06629 snR76snR76 109 nt3.23□□□□□ -1.89
HDA2Q06629 FLO9YAL063C 3969 nt3.23□□□□□ -1.89
HDA2Q06629 IKI3YLR384C 4050 nt3.23□□□□□ -1.89
HDA2Q06629 ORC1YML065W 2745 nt3.22□□□□□ -1.89
HDA2Q06629 FMP32YFL046W 624 nt3.22□□□□□ -1.89
HDA2Q06629 YGL014C-AYGL014C-A 162 nt3.22□□□□□ -1.89
HDA2Q06629 YHR217CYHR217C 462 nt3.22□□□□□ -1.89
HDA2Q06629 YIL059CYIL059C 366 nt3.22□□□□□ -1.89
HDA2Q06629 PCC1YKR095W-A 267 nt3.22□□□□□ -1.89
HDA2Q06629 TFC1YBR123C 1950 nt3.21□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 89.2 ms