Protein–RNA interactions for Protein: Q04711

TY1B-ML1, Transposon Ty1-ML1 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-ML1Q04711 RPL40AYIL148W 387 nt0.47□□□□□ -2.33
TY1B-ML1Q04711 snR191snR191 274 nt0.47□□□□□ -2.33
TY1B-ML1Q04711 YCL001W-AYCL001W-A 462 nt0.47□□□□□ -2.33
TY1B-ML1Q04711 MUK1YPL070W 1839 nt0.47□□□□□ -2.33
TY1B-ML1Q04711 PHO92YDR374C 921 nt0.46□□□□□ -2.34
TY1B-ML1Q04711 COBQ0105 1158 nt0.46□□□□□ -2.34
TY1B-ML1Q04711 DSE2YHR143W 978 nt0.46□□□□□ -2.34
TY1B-ML1Q04711 SPP381YBR152W 876 nt0.46□□□□□ -2.34
TY1B-ML1Q04711 ECM11YDR446W 909 nt0.45□□□□□ -2.34
TY1B-ML1Q04711 YFR056CYFR056C 369 nt0.45□□□□□ -2.34
TY1B-ML1Q04711 YHR022CYHR022C 771 nt0.45□□□□□ -2.34
TY1B-ML1Q04711 YLR290CYLR290C 834 nt0.45□□□□□ -2.34
TY1B-ML1Q04711 UFE1YOR075W 1041 nt0.45□□□□□ -2.34
TY1B-ML1Q04711 DGR2YKL121W 2559 nt0.45□□□□□ -2.34
TY1B-ML1Q04711 YIP1YGR172C 747 nt0.45□□□□□ -2.34
TY1B-ML1Q04711 RPL6BYLR448W 531 nt0.45□□□□□ -2.34
TY1B-ML1Q04711 YNL010WYNL010W 726 nt0.45□□□□□ -2.34
TY1B-ML1Q04711 HIR3YJR140C 4947 nt0.44□□□□□ -2.34
TY1B-ML1Q04711 NCA2YPR155C 1851 nt0.44□□□□□ -2.34
TY1B-ML1Q04711 YCR015CYCR015C 954 nt0.44□□□□□ -2.34
TY1B-ML1Q04711 YGR250CYGR250C 2346 nt0.43□□□□□ -2.34
TY1B-ML1Q04711 LSM7YNL147W 348 nt0.43□□□□□ -2.34
TY1B-ML1Q04711 MVP1YMR004W 1536 nt0.43□□□□□ -2.34
TY1B-ML1Q04711 YCR102W-AYCR102W-A 198 nt0.42□□□□□ -2.34
TY1B-ML1Q04711 BET5YML077W 480 nt0.42□□□□□ -2.34
TY1B-ML1Q04711 ALK1YGL021W 2283 nt0.42□□□□□ -2.34
TY1B-ML1Q04711 CDC5YMR001C 2118 nt0.42□□□□□ -2.34
TY1B-ML1Q04711 RRG1YDR065W 1098 nt0.42□□□□□ -2.34
TY1B-ML1Q04711 YGL138CYGL138C 1038 nt0.42□□□□□ -2.34
TY1B-ML1Q04711 SVP26YHR181W 687 nt0.42□□□□□ -2.34
TY1B-ML1Q04711 YDR042CYDR042C 603 nt0.41□□□□□ -2.34
TY1B-ML1Q04711 YGL118CYGL118C 438 nt0.41□□□□□ -2.34
TY1B-ML1Q04711 TAN1YGL232W 870 nt0.41□□□□□ -2.34
TY1B-ML1Q04711 YLL007CYLL007C 1998 nt0.4□□□□□ -2.34
TY1B-ML1Q04711 RPL38YLR325C 237 nt0.4□□□□□ -2.35
TY1B-ML1Q04711 CMC2YBL059C-A 330 nt0.4□□□□□ -2.35
TY1B-ML1Q04711 LYS14YDR034C 2373 nt0.4□□□□□ -2.35
TY1B-ML1Q04711 MUM3YOR298W 1440 nt0.4□□□□□ -2.35
TY1B-ML1Q04711 YGR114CYGR114C 390 nt0.4□□□□□ -2.35
TY1B-ML1Q04711 CYB5YNL111C 363 nt0.4□□□□□ -2.35
TY1B-ML1Q04711 MER1YNL210W 813 nt0.4□□□□□ -2.35
TY1B-ML1Q04711 YLL054CYLL054C 2532 nt0.38□□□□□ -2.35
TY1B-ML1Q04711 YEL009C-AYEL009C-A 408 nt0.38□□□□□ -2.35
TY1B-ML1Q04711 PRS3YHL011C 963 nt0.38□□□□□ -2.35
TY1B-ML1Q04711 PFK27YOL136C 1194 nt0.38□□□□□ -2.35
TY1B-ML1Q04711 snR45snR45 172 nt0.38□□□□□ -2.35
TY1B-ML1Q04711 YHL009W-AYHL009W-A 1242 nt0.37□□□□□ -2.35
TY1B-ML1Q04711 HYR1YIR037W 492 nt0.37□□□□□ -2.35
TY1B-ML1Q04711 ABM1YJR108W 372 nt0.37□□□□□ -2.35
TY1B-ML1Q04711 SNA4YDL123W 423 nt0.37□□□□□ -2.35
TY1B-ML1Q04711 YDR210W-AYDR210W-A 1317 nt0.37□□□□□ -2.35
TY1B-ML1Q04711 EDC1YGL222C 528 nt0.37□□□□□ -2.35
TY1B-ML1Q04711 FYV4YHR059W 393 nt0.37□□□□□ -2.35
TY1B-ML1Q04711 YOR343W-AYOR343W-A 1317 nt0.37□□□□□ -2.35
TY1B-ML1Q04711 NUT1YGL151W 3399 nt0.36□□□□□ -2.35
TY1B-ML1Q04711 YMR178WYMR178W 825 nt0.36□□□□□ -2.35
TY1B-ML1Q04711 MRPL40YPL173W 894 nt0.36□□□□□ -2.35
TY1B-ML1Q04711 DSE1YER124C 1722 nt0.36□□□□□ -2.35
TY1B-ML1Q04711 YER088C-AYER088C-A 324 nt0.35□□□□□ -2.35
TY1B-ML1Q04711 SRB4YER022W 2064 nt0.35□□□□□ -2.35
TY1B-ML1Q04711 YDR248CYDR248C 582 nt0.34□□□□□ -2.35
TY1B-ML1Q04711 YJL026C-AYJL026C-A 222 nt0.34□□□□□ -2.35
TY1B-ML1Q04711 SEC22YLR268W 645 nt0.34□□□□□ -2.35
TY1B-ML1Q04711 RPS10AYOR293W 318 nt0.34□□□□□ -2.35
TY1B-ML1Q04711 SMY1YKL079W 1971 nt0.34□□□□□ -2.35
TY1B-ML1Q04711 SLU7YDR088C 1149 nt0.34□□□□□ -2.36
TY1B-ML1Q04711 PRM8YGL053W 714 nt0.34□□□□□ -2.36
TY1B-ML1Q04711 LTO1YNL260C 597 nt0.34□□□□□ -2.36
TY1B-ML1Q04711 ALG5YPL227C 1005 nt0.34□□□□□ -2.36
TY1B-ML1Q04711 MGR1YCL044C 1254 nt0.34□□□□□ -2.36
TY1B-ML1Q04711 ADF1YCL058W-A 342 nt0.34□□□□□ -2.36
TY1B-ML1Q04711 URB1YKL014C 5295 nt0.34□□□□□ -2.36
TY1B-ML1Q04711 YDR286CYDR286C 345 nt0.33□□□□□ -2.36
TY1B-ML1Q04711 RPL9AYGL147C 576 nt0.33□□□□□ -2.36
TY1B-ML1Q04711 UAF30YOR295W 687 nt0.33□□□□□ -2.36
TY1B-ML1Q04711 SMB1YER029C 591 nt0.32□□□□□ -2.36
TY1B-ML1Q04711 HOP2YGL033W 657 nt0.32□□□□□ -2.36
TY1B-ML1Q04711 SMD1YGR074W 441 nt0.32□□□□□ -2.36
TY1B-ML1Q04711 IRC14YOR135C 342 nt0.32□□□□□ -2.36
TY1B-ML1Q04711 ICS2YBR157C 768 nt0.32□□□□□ -2.36
TY1B-ML1Q04711 UPF3YGR072W 1164 nt0.32□□□□□ -2.36
TY1B-ML1Q04711 FIG1YBR040W 897 nt0.32□□□□□ -2.36
TY1B-ML1Q04711 YDR261W-AYDR261W-A 1317 nt0.31□□□□□ -2.36
TY1B-ML1Q04711 snR68snR68 136 nt0.31□□□□□ -2.36
TY1B-ML1Q04711 ECM12YHR021W-A 456 nt0.3□□□□□ -2.36
TY1B-ML1Q04711 YIL012WYIL012W 342 nt0.3□□□□□ -2.36
TY1B-ML1Q04711 RAM2YKL019W 951 nt0.3□□□□□ -2.36
TY1B-ML1Q04711 ARL3YPL051W 597 nt0.3□□□□□ -2.36
TY1B-ML1Q04711 NUP188YML103C 4968 nt0.3□□□□□ -2.36
TY1B-ML1Q04711 AIM9YER080W 1884 nt0.3□□□□□ -2.36
TY1B-ML1Q04711 BPH1YCR032W 6504 nt0.3□□□□□ -2.36
TY1B-ML1Q04711 SPO77YLR341W 1434 nt0.3□□□□□ -2.36
TY1B-ML1Q04711 STB6YKL072W 2301 nt0.3□□□□□ -2.36
TY1B-ML1Q04711 SPO12YHR152W 522 nt0.29□□□□□ -2.36
TY1B-ML1Q04711 YIL141WYIL141W 390 nt0.29□□□□□ -2.36
TY1B-ML1Q04711 COF1YLL050C 432 nt0.29□□□□□ -2.36
TY1B-ML1Q04711 YET2YMR040W 483 nt0.29□□□□□ -2.36
TY1B-ML1Q04711 ESP1YGR098C 4893 nt0.29□□□□□ -2.36
TY1B-ML1Q04711 NGG1YDR176W 2109 nt0.28□□□□□ -2.36
TY1B-ML1Q04711 NUP120YKL057C 3114 nt0.28□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 22.7 ms