Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC061975.6-201ENST00000579045 1553 ntBASIC15.53■□□□□ 0.08
HIST1H1AQ02539 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HIST1H1AQ02539 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HIST1H1AQ02539 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
HIST1H1AQ02539 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
HIST1H1AQ02539 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
HIST1H1AQ02539 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HIST1H1AQ02539 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
HIST1H1AQ02539 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HIST1H1AQ02539 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
HIST1H1AQ02539 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HIST1H1AQ02539 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HIST1H1AQ02539 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HIST1H1AQ02539 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
HIST1H1AQ02539 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.52■□□□□ 0.07
HIST1H1AQ02539 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
HIST1H1AQ02539 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
HIST1H1AQ02539 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC15.52■□□□□ 0.07
HIST1H1AQ02539 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
HIST1H1AQ02539 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HIST1H1AQ02539 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HIST1H1AQ02539 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HIST1H1AQ02539 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC15.52■□□□□ 0.07
HIST1H1AQ02539 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC15.51■□□□□ 0.07
HIST1H1AQ02539 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.51■□□□□ 0.07
HIST1H1AQ02539 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H1AQ02539 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H1AQ02539 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.51■□□□□ 0.07
HIST1H1AQ02539 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H1AQ02539 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H1AQ02539 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC15.51■□□□□ 0.07
HIST1H1AQ02539 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H1AQ02539 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
HIST1H1AQ02539 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H1AQ02539 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H1AQ02539 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H1AQ02539 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H1AQ02539 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H1AQ02539 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H1AQ02539 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
HIST1H1AQ02539 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC15.51■□□□□ 0.07
HIST1H1AQ02539 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
HIST1H1AQ02539 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.51■□□□□ 0.07
HIST1H1AQ02539 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H1AQ02539 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H1AQ02539 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.51■□□□□ 0.07
HIST1H1AQ02539 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.51■□□□□ 0.07
HIST1H1AQ02539 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H1AQ02539 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HIST1H1AQ02539 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC15.51■□□□□ 0.07
HIST1H1AQ02539 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H1AQ02539 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H1AQ02539 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC15.5■□□□□ 0.07
HIST1H1AQ02539 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H1AQ02539 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H1AQ02539 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H1AQ02539 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HIST1H1AQ02539 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
HIST1H1AQ02539 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H1AQ02539 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
HIST1H1AQ02539 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.5■□□□□ 0.07
HIST1H1AQ02539 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H1AQ02539 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H1AQ02539 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
HIST1H1AQ02539 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC15.5■□□□□ 0.07
HIST1H1AQ02539 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HIST1H1AQ02539 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
HIST1H1AQ02539 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H1AQ02539 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC15.5■□□□□ 0.07
HIST1H1AQ02539 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H1AQ02539 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H1AQ02539 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
HIST1H1AQ02539 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
HIST1H1AQ02539 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H1AQ02539 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
HIST1H1AQ02539 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H1AQ02539 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC15.49■□□□□ 0.07
HIST1H1AQ02539 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H1AQ02539 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HIST1H1AQ02539 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H1AQ02539 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H1AQ02539 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.49■□□□□ 0.07
HIST1H1AQ02539 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.49■□□□□ 0.07
HIST1H1AQ02539 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H1AQ02539 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H1AQ02539 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
HIST1H1AQ02539 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H1AQ02539 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H1AQ02539 POU5F1P4-201ENST00000413175 1085 ntBASIC15.49■□□□□ 0.07
HIST1H1AQ02539 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.49■□□□□ 0.07
HIST1H1AQ02539 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC15.49■□□□□ 0.07
HIST1H1AQ02539 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC15.49■□□□□ 0.07
HIST1H1AQ02539 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H1AQ02539 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H1AQ02539 AC120498.10-201ENST00000621827 505 ntBASIC15.49■□□□□ 0.07
HIST1H1AQ02539 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H1AQ02539 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HIST1H1AQ02539 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
HIST1H1AQ02539 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.49■□□□□ 0.07
HIST1H1AQ02539 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms