Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CDKL1Q00532 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CDKL1Q00532 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20■□□□□ 0.79
CDKL1Q00532 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDKL1Q00532 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
CDKL1Q00532 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDKL1Q00532 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20■□□□□ 0.79
CDKL1Q00532 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20■□□□□ 0.79
CDKL1Q00532 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20■□□□□ 0.79
CDKL1Q00532 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CDKL1Q00532 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CDKL1Q00532 TERF1P5-201ENST00000477545 1207 ntBASIC20■□□□□ 0.79
CDKL1Q00532 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20■□□□□ 0.79
CDKL1Q00532 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CDKL1Q00532 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20■□□□□ 0.79
CDKL1Q00532 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDKL1Q00532 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20■□□□□ 0.79
CDKL1Q00532 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CDKL1Q00532 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDKL1Q00532 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDKL1Q00532 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDKL1Q00532 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CDKL1Q00532 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CDKL1Q00532 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CDKL1Q00532 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.99■□□□□ 0.79
CDKL1Q00532 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.99■□□□□ 0.79
CDKL1Q00532 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.99■□□□□ 0.79
CDKL1Q00532 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDKL1Q00532 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CDKL1Q00532 CDV3P1-201ENST00000471403 739 ntBASIC19.99■□□□□ 0.79
CDKL1Q00532 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.99■□□□□ 0.79
CDKL1Q00532 AC137761.2-201ENST00000561729 223 ntBASIC19.99■□□□□ 0.79
CDKL1Q00532 AC145350.3-201ENST00000569033 163 ntBASIC19.99■□□□□ 0.79
CDKL1Q00532 MIR2861-201ENST00000636310 90 ntBASIC19.99■□□□□ 0.79
CDKL1Q00532 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDKL1Q00532 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.99■□□□□ 0.79
CDKL1Q00532 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.99■□□□□ 0.79
CDKL1Q00532 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDKL1Q00532 PCDHAC2-203ENST00000615316 3011 ntBASIC19.98■□□□□ 0.79
CDKL1Q00532 AC073314.1-201ENST00000568729 2216 ntBASIC19.98■□□□□ 0.79
CDKL1Q00532 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDKL1Q00532 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.98■□□□□ 0.79
CDKL1Q00532 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDKL1Q00532 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.98■□□□□ 0.79
CDKL1Q00532 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDKL1Q00532 AC007322.4-201ENST00000509611 723 ntBASIC19.98■□□□□ 0.79
CDKL1Q00532 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.98■□□□□ 0.79
CDKL1Q00532 AL162412.1-201ENST00000567129 965 ntBASIC19.98■□□□□ 0.79
CDKL1Q00532 MIR5787-201ENST00000611784 55 ntBASIC19.98■□□□□ 0.79
CDKL1Q00532 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.98■□□□□ 0.79
CDKL1Q00532 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.98■□□□□ 0.79
CDKL1Q00532 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.98■□□□□ 0.79
CDKL1Q00532 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDKL1Q00532 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CDKL1Q00532 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.98■□□□□ 0.79
CDKL1Q00532 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.98■□□□□ 0.79
CDKL1Q00532 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CDKL1Q00532 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.98■□□□□ 0.79
CDKL1Q00532 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.98■□□□□ 0.79
CDKL1Q00532 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.98■□□□□ 0.79
CDKL1Q00532 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.97■□□□□ 0.79
CDKL1Q00532 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.97■□□□□ 0.79
CDKL1Q00532 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.97■□□□□ 0.79
CDKL1Q00532 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDKL1Q00532 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDKL1Q00532 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDKL1Q00532 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CDKL1Q00532 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.97■□□□□ 0.79
CDKL1Q00532 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDKL1Q00532 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.97■□□□□ 0.79
CDKL1Q00532 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.97■□□□□ 0.79
CDKL1Q00532 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.97■□□□□ 0.79
CDKL1Q00532 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CDKL1Q00532 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CDKL1Q00532 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CDKL1Q00532 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDKL1Q00532 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDKL1Q00532 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.96■□□□□ 0.79
CDKL1Q00532 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDKL1Q00532 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDKL1Q00532 AC020907.5-201ENST00000624372 1936 ntBASIC19.96■□□□□ 0.79
CDKL1Q00532 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDKL1Q00532 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDKL1Q00532 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CDKL1Q00532 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.96■□□□□ 0.79
CDKL1Q00532 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.96■□□□□ 0.79
CDKL1Q00532 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CDKL1Q00532 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDKL1Q00532 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDKL1Q00532 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDKL1Q00532 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDKL1Q00532 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.96■□□□□ 0.79
CDKL1Q00532 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDKL1Q00532 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CDKL1Q00532 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDKL1Q00532 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDKL1Q00532 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDKL1Q00532 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDKL1Q00532 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.95■□□□□ 0.78
CDKL1Q00532 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms