Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL20P78556 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL20P78556 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL20P78556 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL20P78556 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCL20P78556 ABHD17AP3-201ENST00000503096 1137 ntBASIC16.04■□□□□ 0.16
CCL20P78556 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.04■□□□□ 0.16
CCL20P78556 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL20P78556 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCL20P78556 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.04■□□□□ 0.16
CCL20P78556 LTB4R2-202ENST00000528054 3092 ntBASIC16.04■□□□□ 0.16
CCL20P78556 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL20P78556 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCL20P78556 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCL20P78556 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL20P78556 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CCL20P78556 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL20P78556 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL20P78556 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CCL20P78556 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL20P78556 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL20P78556 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL20P78556 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL20P78556 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCL20P78556 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL20P78556 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL20P78556 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCL20P78556 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL20P78556 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CCL20P78556 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CCL20P78556 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL20P78556 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL20P78556 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCL20P78556 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCL20P78556 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCL20P78556 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
CCL20P78556 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.03■□□□□ 0.16
CCL20P78556 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.03■□□□□ 0.16
CCL20P78556 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL20P78556 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.03■□□□□ 0.16
CCL20P78556 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCL20P78556 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCL20P78556 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.02■□□□□ 0.16
CCL20P78556 AC011484.1-201ENST00000377652 1995 ntBASIC16.02■□□□□ 0.16
CCL20P78556 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CCL20P78556 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCL20P78556 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
CCL20P78556 Z82202.1-201ENST00000623446 1880 ntBASIC16.02■□□□□ 0.16
CCL20P78556 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CCL20P78556 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCL20P78556 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCL20P78556 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.02■□□□□ 0.16
CCL20P78556 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.02■□□□□ 0.16
CCL20P78556 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.02■□□□□ 0.16
CCL20P78556 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
CCL20P78556 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.15
CCL20P78556 BX005040.4-201ENST00000637145 1518 ntBASIC16.02■□□□□ 0.15
CCL20P78556 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCL20P78556 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CCL20P78556 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.02■□□□□ 0.15
CCL20P78556 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCL20P78556 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCL20P78556 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCL20P78556 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCL20P78556 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCL20P78556 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CCL20P78556 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CCL20P78556 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.01■□□□□ 0.15
CCL20P78556 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CCL20P78556 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.01■□□□□ 0.15
CCL20P78556 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCL20P78556 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCL20P78556 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCL20P78556 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCL20P78556 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCL20P78556 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CCL20P78556 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.01■□□□□ 0.15
CCL20P78556 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCL20P78556 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.01■□□□□ 0.15
CCL20P78556 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CCL20P78556 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCL20P78556 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CCL20P78556 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CCL20P78556 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCL20P78556 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCL20P78556 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCL20P78556 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCL20P78556 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CCL20P78556 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.01■□□□□ 0.15
CCL20P78556 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCL20P78556 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCL20P78556 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCL20P78556 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CCL20P78556 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CCL20P78556 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CCL20P78556 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CCL20P78556 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16■□□□□ 0.15
CCL20P78556 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCL20P78556 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCL20P78556 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms