Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.51■□□□□ 0.23
SPCS3P61009 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SPCS3P61009 AC087289.5-201ENST00000586076 3175 ntBASIC16.51■□□□□ 0.23
SPCS3P61009 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPCS3P61009 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPCS3P61009 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.51■□□□□ 0.23
SPCS3P61009 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SPCS3P61009 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SPCS3P61009 AC061975.6-201ENST00000579045 1553 ntBASIC16.51■□□□□ 0.23
SPCS3P61009 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.51■□□□□ 0.23
SPCS3P61009 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.51■□□□□ 0.23
SPCS3P61009 PCDHAC2-203ENST00000615316 3011 ntBASIC16.51■□□□□ 0.23
SPCS3P61009 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.5■□□□□ 0.23
SPCS3P61009 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPCS3P61009 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPCS3P61009 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPCS3P61009 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SPCS3P61009 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPCS3P61009 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SPCS3P61009 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.5■□□□□ 0.23
SPCS3P61009 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.5■□□□□ 0.23
SPCS3P61009 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPCS3P61009 MIR572-201ENST00000384983 95 ntBASIC16.5■□□□□ 0.23
SPCS3P61009 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.5■□□□□ 0.23
SPCS3P61009 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.5■□□□□ 0.23
SPCS3P61009 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SPCS3P61009 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPCS3P61009 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPCS3P61009 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPCS3P61009 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.5■□□□□ 0.23
SPCS3P61009 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
SPCS3P61009 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPCS3P61009 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SPCS3P61009 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPCS3P61009 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPCS3P61009 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SPCS3P61009 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SPCS3P61009 AC092720.2-201ENST00000602388 1665 ntBASIC16.5■□□□□ 0.23
SPCS3P61009 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SPCS3P61009 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPCS3P61009 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPCS3P61009 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SPCS3P61009 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
SPCS3P61009 AFG3L1P-217ENST00000557444 2447 ntBASIC16.49■□□□□ 0.23
SPCS3P61009 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
SPCS3P61009 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPCS3P61009 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SPCS3P61009 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPCS3P61009 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SPCS3P61009 AC099778.1-201ENST00000568593 1911 ntBASIC16.49■□□□□ 0.23
SPCS3P61009 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.49■□□□□ 0.23
SPCS3P61009 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SPCS3P61009 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPCS3P61009 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPCS3P61009 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPCS3P61009 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SPCS3P61009 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.49■□□□□ 0.23
SPCS3P61009 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.49■□□□□ 0.23
SPCS3P61009 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPCS3P61009 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SPCS3P61009 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPCS3P61009 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPCS3P61009 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.49■□□□□ 0.23
SPCS3P61009 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.49■□□□□ 0.23
SPCS3P61009 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.49■□□□□ 0.23
SPCS3P61009 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.49■□□□□ 0.23
SPCS3P61009 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SPCS3P61009 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SPCS3P61009 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPCS3P61009 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPCS3P61009 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SPCS3P61009 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPCS3P61009 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SPCS3P61009 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.48■□□□□ 0.23
SPCS3P61009 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
SPCS3P61009 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SPCS3P61009 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.48■□□□□ 0.23
SPCS3P61009 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.48■□□□□ 0.23
SPCS3P61009 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPCS3P61009 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPCS3P61009 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SPCS3P61009 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SPCS3P61009 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPCS3P61009 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SPCS3P61009 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.48■□□□□ 0.23
SPCS3P61009 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.48■□□□□ 0.23
SPCS3P61009 POU5F1P4-201ENST00000413175 1085 ntBASIC16.48■□□□□ 0.23
SPCS3P61009 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.48■□□□□ 0.23
SPCS3P61009 AC008175.2-201ENST00000612840 297 ntBASIC16.48■□□□□ 0.23
SPCS3P61009 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPCS3P61009 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPCS3P61009 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPCS3P61009 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPCS3P61009 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.48■□□□□ 0.23
SPCS3P61009 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SPCS3P61009 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.48■□□□□ 0.23
SPCS3P61009 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPCS3P61009 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.47■□□□□ 0.23
SPCS3P61009 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPCS3P61009 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms