Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
EIF3EP60228 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EIF3EP60228 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EIF3EP60228 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
EIF3EP60228 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
EIF3EP60228 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21■□□□□ 0.95
EIF3EP60228 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21■□□□□ 0.95
EIF3EP60228 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21■□□□□ 0.95
EIF3EP60228 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21■□□□□ 0.95
EIF3EP60228 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
EIF3EP60228 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
EIF3EP60228 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21■□□□□ 0.95
EIF3EP60228 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
EIF3EP60228 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21■□□□□ 0.95
EIF3EP60228 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
EIF3EP60228 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
EIF3EP60228 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21■□□□□ 0.95
EIF3EP60228 AC097381.1-201ENST00000429019 1296 ntBASIC21■□□□□ 0.95
EIF3EP60228 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
EIF3EP60228 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21■□□□□ 0.95
EIF3EP60228 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21■□□□□ 0.95
EIF3EP60228 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21■□□□□ 0.95
EIF3EP60228 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21■□□□□ 0.95
EIF3EP60228 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21■□□□□ 0.95
EIF3EP60228 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21■□□□□ 0.95
EIF3EP60228 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
EIF3EP60228 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
EIF3EP60228 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21■□□□□ 0.95
EIF3EP60228 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
EIF3EP60228 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EIF3EP60228 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
EIF3EP60228 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
EIF3EP60228 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EIF3EP60228 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EIF3EP60228 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.99■□□□□ 0.95
EIF3EP60228 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.99■□□□□ 0.95
EIF3EP60228 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EIF3EP60228 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EIF3EP60228 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
EIF3EP60228 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.99■□□□□ 0.95
EIF3EP60228 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
EIF3EP60228 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
EIF3EP60228 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.99■□□□□ 0.95
EIF3EP60228 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EIF3EP60228 CDV3P1-201ENST00000471403 739 ntBASIC20.99■□□□□ 0.95
EIF3EP60228 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.99■□□□□ 0.95
EIF3EP60228 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
EIF3EP60228 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.99■□□□□ 0.95
EIF3EP60228 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
EIF3EP60228 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.99■□□□□ 0.95
EIF3EP60228 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
EIF3EP60228 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.99■□□□□ 0.95
EIF3EP60228 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
EIF3EP60228 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.99■□□□□ 0.95
EIF3EP60228 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EIF3EP60228 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.99■□□□□ 0.95
EIF3EP60228 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.99■□□□□ 0.95
EIF3EP60228 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.99■□□□□ 0.95
EIF3EP60228 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EIF3EP60228 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EIF3EP60228 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.98■□□□□ 0.95
EIF3EP60228 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
EIF3EP60228 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.98■□□□□ 0.95
EIF3EP60228 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.98■□□□□ 0.95
EIF3EP60228 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.98■□□□□ 0.95
EIF3EP60228 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EIF3EP60228 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.98■□□□□ 0.95
EIF3EP60228 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EIF3EP60228 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
EIF3EP60228 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EIF3EP60228 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
EIF3EP60228 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EIF3EP60228 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.97■□□□□ 0.95
EIF3EP60228 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EIF3EP60228 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EIF3EP60228 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
EIF3EP60228 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
EIF3EP60228 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EIF3EP60228 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EIF3EP60228 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.97■□□□□ 0.95
EIF3EP60228 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.97■□□□□ 0.95
EIF3EP60228 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.97■□□□□ 0.95
EIF3EP60228 AC087623.3-201ENST00000607047 1098 ntBASIC20.97■□□□□ 0.95
EIF3EP60228 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
EIF3EP60228 MIR6821-201ENST00000617625 74 ntBASIC20.97■□□□□ 0.95
EIF3EP60228 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
EIF3EP60228 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
EIF3EP60228 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EIF3EP60228 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.96■□□□□ 0.95
EIF3EP60228 KRT8P36-201ENST00000489121 1440 ntBASIC20.96■□□□□ 0.95
EIF3EP60228 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EIF3EP60228 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.96■□□□□ 0.95
EIF3EP60228 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
EIF3EP60228 SMG8-203ENST00000578922 2178 ntBASIC20.96■□□□□ 0.95
EIF3EP60228 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EIF3EP60228 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.96■□□□□ 0.95
EIF3EP60228 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EIF3EP60228 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EIF3EP60228 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EIF3EP60228 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms