Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CLDN12P56749 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN12P56749 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN12P56749 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN12P56749 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN12P56749 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CLDN12P56749 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN12P56749 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN12P56749 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN12P56749 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN12P56749 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN12P56749 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
CLDN12P56749 AP004607.4-201ENST00000530158 1459 ntBASIC17.67■□□□□ 0.42
CLDN12P56749 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN12P56749 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN12P56749 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN12P56749 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN12P56749 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN12P56749 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN12P56749 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN12P56749 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN12P56749 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN12P56749 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN12P56749 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN12P56749 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN12P56749 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN12P56749 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN12P56749 AL356441.2-201ENST00000443009 864 ntBASIC17.66■□□□□ 0.42
CLDN12P56749 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN12P56749 AC131281.2-201ENST00000520478 145 ntBASIC17.66■□□□□ 0.42
CLDN12P56749 IGHV3-19-201ENST00000521488 291 ntBASIC17.66■□□□□ 0.42
CLDN12P56749 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN12P56749 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN12P56749 AC233992.3-201ENST00000607491 485 ntBASIC17.66■□□□□ 0.42
CLDN12P56749 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CLDN12P56749 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN12P56749 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN12P56749 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN12P56749 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN12P56749 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CLDN12P56749 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN12P56749 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN12P56749 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN12P56749 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.65■□□□□ 0.42
CLDN12P56749 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN12P56749 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN12P56749 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.65■□□□□ 0.42
CLDN12P56749 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN12P56749 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN12P56749 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN12P56749 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.65■□□□□ 0.42
CLDN12P56749 AC105233.4-201ENST00000642045 216 ntBASIC17.65■□□□□ 0.42
CLDN12P56749 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN12P56749 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN12P56749 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN12P56749 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN12P56749 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN12P56749 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN12P56749 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN12P56749 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN12P56749 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN12P56749 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN12P56749 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
CLDN12P56749 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN12P56749 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN12P56749 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CLDN12P56749 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLDN12P56749 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.64■□□□□ 0.42
CLDN12P56749 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLDN12P56749 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLDN12P56749 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLDN12P56749 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN12P56749 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN12P56749 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN12P56749 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN12P56749 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN12P56749 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN12P56749 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CLDN12P56749 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN12P56749 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN12P56749 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN12P56749 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.64■□□□□ 0.41
CLDN12P56749 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.64■□□□□ 0.41
CLDN12P56749 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN12P56749 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDN12P56749 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN12P56749 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.64■□□□□ 0.41
CLDN12P56749 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CLDN12P56749 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN12P56749 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN12P56749 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
CLDN12P56749 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN12P56749 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN12P56749 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.63■□□□□ 0.41
CLDN12P56749 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN12P56749 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CLDN12P56749 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
CLDN12P56749 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.63■□□□□ 0.41
CLDN12P56749 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.63■□□□□ 0.41
CLDN12P56749 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms