Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.6■□□□□ 0.89
WNT3AP56704 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.6■□□□□ 0.89
WNT3AP56704 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
WNT3AP56704 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
WNT3AP56704 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
WNT3AP56704 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
WNT3AP56704 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
WNT3AP56704 AC008694.1-202ENST00000636953 945 ntBASIC20.6■□□□□ 0.89
WNT3AP56704 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
WNT3AP56704 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.6■□□□□ 0.89
WNT3AP56704 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
WNT3AP56704 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
WNT3AP56704 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
WNT3AP56704 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.6■□□□□ 0.89
WNT3AP56704 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
WNT3AP56704 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
WNT3AP56704 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.6■□□□□ 0.89
WNT3AP56704 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
WNT3AP56704 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
WNT3AP56704 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.6■□□□□ 0.89
WNT3AP56704 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
WNT3AP56704 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.6■□□□□ 0.89
WNT3AP56704 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.6■□□□□ 0.89
WNT3AP56704 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
WNT3AP56704 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
WNT3AP56704 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
WNT3AP56704 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
WNT3AP56704 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
WNT3AP56704 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.59■□□□□ 0.89
WNT3AP56704 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
WNT3AP56704 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.59■□□□□ 0.89
WNT3AP56704 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.59■□□□□ 0.89
WNT3AP56704 RAP2CP1-201ENST00000605103 478 ntBASIC20.59■□□□□ 0.89
WNT3AP56704 AC100791.3-201ENST00000617619 330 ntBASIC20.59■□□□□ 0.89
WNT3AP56704 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.59■□□□□ 0.89
WNT3AP56704 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
WNT3AP56704 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
WNT3AP56704 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
WNT3AP56704 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
WNT3AP56704 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
WNT3AP56704 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.58■□□□□ 0.89
WNT3AP56704 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
WNT3AP56704 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
WNT3AP56704 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
WNT3AP56704 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.58■□□□□ 0.89
WNT3AP56704 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.58■□□□□ 0.89
WNT3AP56704 MCRIP2P1-201ENST00000394346 511 ntBASIC20.58■□□□□ 0.89
WNT3AP56704 PGM5P4-201ENST00000421970 445 ntBASIC20.58■□□□□ 0.89
WNT3AP56704 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
WNT3AP56704 AC026185.1-201ENST00000445748 174 ntBASIC20.58■□□□□ 0.89
WNT3AP56704 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.58■□□□□ 0.89
WNT3AP56704 AC092666.2-201ENST00000613287 246 ntBASIC20.58■□□□□ 0.89
WNT3AP56704 AL356652.1-201ENST00000615962 565 ntBASIC20.58■□□□□ 0.89
WNT3AP56704 OR10C1-204ENST00000622521 1039 ntBASIC20.58■□□□□ 0.89
WNT3AP56704 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
WNT3AP56704 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
WNT3AP56704 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.58■□□□□ 0.88
WNT3AP56704 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
WNT3AP56704 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
WNT3AP56704 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
WNT3AP56704 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
WNT3AP56704 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
WNT3AP56704 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.57■□□□□ 0.88
WNT3AP56704 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
WNT3AP56704 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
WNT3AP56704 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
WNT3AP56704 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
WNT3AP56704 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
WNT3AP56704 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
WNT3AP56704 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
WNT3AP56704 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.57■□□□□ 0.88
WNT3AP56704 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.57■□□□□ 0.88
WNT3AP56704 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
WNT3AP56704 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
WNT3AP56704 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.57■□□□□ 0.88
WNT3AP56704 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
WNT3AP56704 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.57■□□□□ 0.88
WNT3AP56704 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.57■□□□□ 0.88
WNT3AP56704 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
WNT3AP56704 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
WNT3AP56704 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
WNT3AP56704 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
WNT3AP56704 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
WNT3AP56704 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
WNT3AP56704 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
WNT3AP56704 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
WNT3AP56704 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
WNT3AP56704 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
WNT3AP56704 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
WNT3AP56704 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
WNT3AP56704 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
WNT3AP56704 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
WNT3AP56704 AL050303.2-201ENST00000619798 666 ntBASIC20.56■□□□□ 0.88
WNT3AP56704 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
WNT3AP56704 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
WNT3AP56704 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.56■□□□□ 0.88
WNT3AP56704 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
WNT3AP56704 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
WNT3AP56704 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.56■□□□□ 0.88
WNT3AP56704 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms